Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SUMO3P55854 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SUMO3P55854 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SUMO3P55854 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SUMO3P55854 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SUMO3P55854 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
SUMO3P55854 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.87□□□□□ -0.35
SUMO3P55854 AC004554.1-201ENST00000422830 1468 ntBASIC12.87□□□□□ -0.35
SUMO3P55854 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC12.87□□□□□ -0.35
SUMO3P55854 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC12.87□□□□□ -0.35
SUMO3P55854 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
SUMO3P55854 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC12.87□□□□□ -0.35
SUMO3P55854 AC008132.1-202ENST00000342005 1389 ntBASIC12.87□□□□□ -0.35
SUMO3P55854 KRT17P5-201ENST00000332088 839 ntBASIC12.87□□□□□ -0.35
SUMO3P55854 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SUMO3P55854 BANF1P3-201ENST00000412556 261 ntBASIC12.87□□□□□ -0.35
SUMO3P55854 PARVG-202ENST00000415224 999 ntTSL 2 BASIC12.87□□□□□ -0.35
SUMO3P55854 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC12.87□□□□□ -0.35
SUMO3P55854 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC12.87□□□□□ -0.35
SUMO3P55854 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC12.87□□□□□ -0.35
SUMO3P55854 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC12.87□□□□□ -0.35
SUMO3P55854 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC12.87□□□□□ -0.35
SUMO3P55854 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC12.87□□□□□ -0.35
SUMO3P55854 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
SUMO3P55854 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC12.87□□□□□ -0.35
SUMO3P55854 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
SUMO3P55854 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC12.87□□□□□ -0.35
SUMO3P55854 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC12.87□□□□□ -0.35
SUMO3P55854 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SUMO3P55854 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SUMO3P55854 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SUMO3P55854 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.87□□□□□ -0.35
SUMO3P55854 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SUMO3P55854 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.87□□□□□ -0.35
SUMO3P55854 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC12.87□□□□□ -0.35
SUMO3P55854 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SUMO3P55854 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.87□□□□□ -0.35
SUMO3P55854 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
SUMO3P55854 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SUMO3P55854 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.87□□□□□ -0.35
SUMO3P55854 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SUMO3P55854 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SUMO3P55854 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SUMO3P55854 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SUMO3P55854 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SUMO3P55854 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SUMO3P55854 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC12.87□□□□□ -0.35
SUMO3P55854 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SUMO3P55854 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SUMO3P55854 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC12.87□□□□□ -0.35
SUMO3P55854 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
SUMO3P55854 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SUMO3P55854 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SUMO3P55854 KRT18P9-201ENST00000604826 1300 ntBASIC12.87□□□□□ -0.35
SUMO3P55854 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SUMO3P55854 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SUMO3P55854 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SUMO3P55854 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
SUMO3P55854 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
SUMO3P55854 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
SUMO3P55854 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
SUMO3P55854 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SUMO3P55854 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SUMO3P55854 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
SUMO3P55854 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.86□□□□□ -0.35
SUMO3P55854 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SUMO3P55854 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.86□□□□□ -0.35
SUMO3P55854 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.86□□□□□ -0.35
SUMO3P55854 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
SUMO3P55854 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SUMO3P55854 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SUMO3P55854 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.86□□□□□ -0.35
SUMO3P55854 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC12.86□□□□□ -0.35
SUMO3P55854 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC12.86□□□□□ -0.35
SUMO3P55854 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
SUMO3P55854 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SUMO3P55854 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SUMO3P55854 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SUMO3P55854 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SUMO3P55854 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SUMO3P55854 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
SUMO3P55854 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SUMO3P55854 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SUMO3P55854 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SUMO3P55854 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC12.86□□□□□ -0.35
SUMO3P55854 PTPA-217ENST00000434095 870 ntTSL 2 BASIC12.86□□□□□ -0.35
SUMO3P55854 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC12.86□□□□□ -0.35
SUMO3P55854 MSRA-203ENST00000441698 788 ntTSL 2 BASIC12.86□□□□□ -0.35
SUMO3P55854 RPSAP15-201ENST00000448168 861 ntBASIC12.86□□□□□ -0.35
SUMO3P55854 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC12.86□□□□□ -0.35
SUMO3P55854 AC005077.2-201ENST00000449786 690 ntBASIC12.86□□□□□ -0.35
SUMO3P55854 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC12.86□□□□□ -0.35
SUMO3P55854 AC114947.1-202ENST00000514136 344 ntBASIC12.86□□□□□ -0.35
SUMO3P55854 AC005740.1-201ENST00000515639 522 ntBASIC12.86□□□□□ -0.35
SUMO3P55854 ADM-202ENST00000524948 584 ntTSL 2 BASIC12.86□□□□□ -0.35
SUMO3P55854 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SUMO3P55854 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SUMO3P55854 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
SUMO3P55854 NDUFB10P1-201ENST00000567319 521 ntBASIC12.86□□□□□ -0.35
SUMO3P55854 MIR4754-201ENST00000582477 89 ntBASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms