Protein–RNA interactions for Protein: P55196

AFDN, Afadin, humanhuman

Known RBP Predictions only

Length 1,824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AFDNP55196 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
AFDNP55196 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AFDNP55196 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.52■□□□□ 0.4
AFDNP55196 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
AFDNP55196 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC17.52■□□□□ 0.4
AFDNP55196 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
AFDNP55196 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.39
AFDNP55196 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
AFDNP55196 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
AFDNP55196 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
AFDNP55196 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.39
AFDNP55196 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
AFDNP55196 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
AFDNP55196 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
AFDNP55196 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
AFDNP55196 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
AFDNP55196 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AFDNP55196 U3.5-201ENST00000363448 216 ntBASIC17.51■□□□□ 0.39
AFDNP55196 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
AFDNP55196 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
AFDNP55196 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
AFDNP55196 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC17.51■□□□□ 0.39
AFDNP55196 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC17.51■□□□□ 0.39
AFDNP55196 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC17.51■□□□□ 0.39
AFDNP55196 VDAC1P11-201ENST00000458323 852 ntBASIC17.51■□□□□ 0.39
AFDNP55196 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
AFDNP55196 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC17.51■□□□□ 0.39
AFDNP55196 CASP3-205ENST00000517513 964 ntTSL 5 BASIC17.51■□□□□ 0.39
AFDNP55196 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
AFDNP55196 DUT-207ENST00000559416 635 ntTSL 2 BASIC17.51■□□□□ 0.39
AFDNP55196 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC17.51■□□□□ 0.39
AFDNP55196 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC17.51■□□□□ 0.39
AFDNP55196 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC17.51■□□□□ 0.39
AFDNP55196 CR392039.1-201ENST00000623217 204 ntBASIC17.51■□□□□ 0.39
AFDNP55196 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
AFDNP55196 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.51■□□□□ 0.39
AFDNP55196 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.51■□□□□ 0.39
AFDNP55196 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC17.51■□□□□ 0.39
AFDNP55196 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AFDNP55196 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.51■□□□□ 0.39
AFDNP55196 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AFDNP55196 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AFDNP55196 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
AFDNP55196 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC17.51■□□□□ 0.39
AFDNP55196 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
AFDNP55196 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
AFDNP55196 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AFDNP55196 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
AFDNP55196 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AFDNP55196 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC17.51■□□□□ 0.39
AFDNP55196 USP28-214ENST00000545540 3431 ntTSL 2 BASIC17.51■□□□□ 0.39
AFDNP55196 AC099063.4-201ENST00000641099 1602 ntBASIC17.51■□□□□ 0.39
AFDNP55196 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
AFDNP55196 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AFDNP55196 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
AFDNP55196 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
AFDNP55196 GGTLC4P-201ENST00000402176 664 ntBASIC17.51■□□□□ 0.39
AFDNP55196 ACTBP14-201ENST00000411655 1089 ntBASIC17.51■□□□□ 0.39
AFDNP55196 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC17.51■□□□□ 0.39
AFDNP55196 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC17.51■□□□□ 0.39
AFDNP55196 AC023906.1-201ENST00000486386 453 ntBASIC17.51■□□□□ 0.39
AFDNP55196 COQ10BP2-201ENST00000513804 724 ntBASIC17.51■□□□□ 0.39
AFDNP55196 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
AFDNP55196 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC17.51■□□□□ 0.39
AFDNP55196 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AFDNP55196 HNRNPA1P16-201ENST00000575692 955 ntBASIC17.51■□□□□ 0.39
AFDNP55196 AC006116.2-201ENST00000589958 988 ntBASIC17.51■□□□□ 0.39
AFDNP55196 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC17.51■□□□□ 0.39
AFDNP55196 AC139713.2-207ENST00000641556 1292 ntBASIC17.51■□□□□ 0.39
AFDNP55196 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
AFDNP55196 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AFDNP55196 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
AFDNP55196 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
AFDNP55196 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
AFDNP55196 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
AFDNP55196 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AFDNP55196 AC008620.2-201ENST00000510294 1569 ntBASIC17.5■□□□□ 0.39
AFDNP55196 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC17.5■□□□□ 0.39
AFDNP55196 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
AFDNP55196 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC17.5■□□□□ 0.39
AFDNP55196 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC17.5■□□□□ 0.39
AFDNP55196 SALL4P6-201ENST00000429385 1691 ntBASIC17.5■□□□□ 0.39
AFDNP55196 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.5■□□□□ 0.39
AFDNP55196 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
AFDNP55196 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
AFDNP55196 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
AFDNP55196 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
AFDNP55196 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC17.5■□□□□ 0.39
AFDNP55196 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
AFDNP55196 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC17.5■□□□□ 0.39
AFDNP55196 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC17.5■□□□□ 0.39
AFDNP55196 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AFDNP55196 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AFDNP55196 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
AFDNP55196 AC089987.1-201ENST00000551654 2209 ntBASIC17.5■□□□□ 0.39
AFDNP55196 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AFDNP55196 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
AFDNP55196 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
AFDNP55196 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
AFDNP55196 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms