Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CPT1AP50416 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CPT1AP50416 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CPT1AP50416 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CPT1AP50416 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.62■□□□□ 0.09
CPT1AP50416 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CPT1AP50416 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.62■□□□□ 0.09
CPT1AP50416 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
CPT1AP50416 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CPT1AP50416 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CPT1AP50416 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CPT1AP50416 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CPT1AP50416 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CPT1AP50416 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CPT1AP50416 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CPT1AP50416 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
CPT1AP50416 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CPT1AP50416 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CPT1AP50416 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CPT1AP50416 DKKL1P1-201ENST00000400550 698 ntBASIC15.62■□□□□ 0.09
CPT1AP50416 MIR1307-201ENST00000408840 149 ntBASIC15.62■□□□□ 0.09
CPT1AP50416 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC15.62■□□□□ 0.09
CPT1AP50416 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC15.62■□□□□ 0.09
CPT1AP50416 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC15.62■□□□□ 0.09
CPT1AP50416 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CPT1AP50416 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
CPT1AP50416 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CPT1AP50416 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
CPT1AP50416 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.62■□□□□ 0.09
CPT1AP50416 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CPT1AP50416 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.62■□□□□ 0.09
CPT1AP50416 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CPT1AP50416 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CPT1AP50416 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.62■□□□□ 0.09
CPT1AP50416 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CPT1AP50416 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.62■□□□□ 0.09
CPT1AP50416 AC068760.1-201ENST00000493579 1953 ntBASIC15.62■□□□□ 0.09
CPT1AP50416 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CPT1AP50416 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CPT1AP50416 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC15.62■□□□□ 0.09
CPT1AP50416 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CPT1AP50416 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CPT1AP50416 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CPT1AP50416 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPT1AP50416 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CPT1AP50416 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPT1AP50416 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPT1AP50416 EML1-203ENST00000334192 4064 ntTSL 5 BASIC15.61■□□□□ 0.09
CPT1AP50416 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CPT1AP50416 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPT1AP50416 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC15.61■□□□□ 0.09
CPT1AP50416 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPT1AP50416 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CPT1AP50416 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPT1AP50416 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPT1AP50416 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPT1AP50416 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPT1AP50416 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
CPT1AP50416 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.61■□□□□ 0.09
CPT1AP50416 MIR566-201ENST00000385187 94 ntBASIC15.61■□□□□ 0.09
CPT1AP50416 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CPT1AP50416 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
CPT1AP50416 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPT1AP50416 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC15.61■□□□□ 0.09
CPT1AP50416 AP000244.1-201ENST00000424582 201 ntBASIC15.61■□□□□ 0.09
CPT1AP50416 AL512599.1-201ENST00000430724 685 ntBASIC15.61■□□□□ 0.09
CPT1AP50416 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CPT1AP50416 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC15.61■□□□□ 0.09
CPT1AP50416 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CPT1AP50416 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC15.61■□□□□ 0.09
CPT1AP50416 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC15.61■□□□□ 0.09
CPT1AP50416 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC15.61■□□□□ 0.09
CPT1AP50416 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC15.61■□□□□ 0.09
CPT1AP50416 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CPT1AP50416 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CPT1AP50416 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC15.61■□□□□ 0.09
CPT1AP50416 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC15.61■□□□□ 0.09
CPT1AP50416 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPT1AP50416 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC15.61■□□□□ 0.09
CPT1AP50416 AC068831.5-201ENST00000557387 328 ntBASIC15.61■□□□□ 0.09
CPT1AP50416 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CPT1AP50416 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CPT1AP50416 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC15.61■□□□□ 0.09
CPT1AP50416 RPS5-204ENST00000598098 536 ntTSL 2 BASIC15.61■□□□□ 0.09
CPT1AP50416 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC15.61■□□□□ 0.09
CPT1AP50416 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
CPT1AP50416 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CPT1AP50416 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPT1AP50416 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CPT1AP50416 TUBB8P4-201ENST00000511806 1324 ntBASIC15.61■□□□□ 0.09
CPT1AP50416 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPT1AP50416 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPT1AP50416 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CPT1AP50416 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
CPT1AP50416 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPT1AP50416 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPT1AP50416 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC15.61■□□□□ 0.09
CPT1AP50416 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPT1AP50416 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPT1AP50416 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms