Protein–RNA interactions for Protein: P47898

HTR5A, 5-hydroxytryptamine receptor 5A, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR5AP47898 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC12.63□□□□□ -0.39
HTR5AP47898 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HTR5AP47898 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC12.63□□□□□ -0.39
HTR5AP47898 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
HTR5AP47898 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC12.63□□□□□ -0.39
HTR5AP47898 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HTR5AP47898 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HTR5AP47898 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HTR5AP47898 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
HTR5AP47898 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HTR5AP47898 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HTR5AP47898 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HTR5AP47898 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
HTR5AP47898 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HTR5AP47898 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12.63□□□□□ -0.39
HTR5AP47898 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.63□□□□□ -0.39
HTR5AP47898 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
HTR5AP47898 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
HTR5AP47898 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
HTR5AP47898 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.63□□□□□ -0.39
HTR5AP47898 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
HTR5AP47898 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HTR5AP47898 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
HTR5AP47898 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
HTR5AP47898 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HTR5AP47898 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.63□□□□□ -0.39
HTR5AP47898 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC12.62□□□□□ -0.39
HTR5AP47898 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HTR5AP47898 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.62□□□□□ -0.39
HTR5AP47898 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HTR5AP47898 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC12.62□□□□□ -0.39
HTR5AP47898 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.62□□□□□ -0.39
HTR5AP47898 AL022313.4-201ENST00000562756 2046 ntBASIC12.62□□□□□ -0.39
HTR5AP47898 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HTR5AP47898 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC12.62□□□□□ -0.39
HTR5AP47898 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.62□□□□□ -0.39
HTR5AP47898 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HTR5AP47898 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HTR5AP47898 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HTR5AP47898 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HTR5AP47898 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.62□□□□□ -0.39
HTR5AP47898 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC12.62□□□□□ -0.39
HTR5AP47898 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC12.62□□□□□ -0.39
HTR5AP47898 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
HTR5AP47898 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HTR5AP47898 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
HTR5AP47898 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HTR5AP47898 AC144522.1-201ENST00000625111 1658 ntBASIC12.62□□□□□ -0.39
HTR5AP47898 KRT8P24-201ENST00000560290 1559 ntBASIC12.62□□□□□ -0.39
HTR5AP47898 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HTR5AP47898 LAP3P2-201ENST00000454686 1454 ntBASIC12.62□□□□□ -0.39
HTR5AP47898 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HTR5AP47898 KRT8P29-201ENST00000420409 1371 ntBASIC12.62□□□□□ -0.39
HTR5AP47898 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HTR5AP47898 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
HTR5AP47898 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HTR5AP47898 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
HTR5AP47898 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
HTR5AP47898 TUBB8P8-201ENST00000458717 1058 ntBASIC12.62□□□□□ -0.39
HTR5AP47898 AC006122.1-201ENST00000493323 440 ntBASIC12.62□□□□□ -0.39
HTR5AP47898 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC12.62□□□□□ -0.39
HTR5AP47898 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC12.62□□□□□ -0.39
HTR5AP47898 NOP2-220ENST00000545915 630 ntTSL 2 BASIC12.62□□□□□ -0.39
HTR5AP47898 AC005730.2-201ENST00000564549 1184 ntBASIC12.62□□□□□ -0.39
HTR5AP47898 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC12.62□□□□□ -0.39
HTR5AP47898 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC12.62□□□□□ -0.39
HTR5AP47898 NAA38-206ENST00000576384 424 ntTSL 2 BASIC12.62□□□□□ -0.39
HTR5AP47898 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC12.62□□□□□ -0.39
HTR5AP47898 AC008805.1-201ENST00000590892 364 ntBASIC12.62□□□□□ -0.39
HTR5AP47898 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC12.62□□□□□ -0.39
HTR5AP47898 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.62□□□□□ -0.39
HTR5AP47898 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC12.62□□□□□ -0.39
HTR5AP47898 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC12.62□□□□□ -0.39
HTR5AP47898 AL096828.3-201ENST00000615354 462 ntBASIC12.62□□□□□ -0.39
HTR5AP47898 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HTR5AP47898 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
HTR5AP47898 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
HTR5AP47898 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HTR5AP47898 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.62□□□□□ -0.39
HTR5AP47898 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HTR5AP47898 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HTR5AP47898 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HTR5AP47898 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.62□□□□□ -0.39
HTR5AP47898 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.62□□□□□ -0.39
HTR5AP47898 PCDHA5-203ENST00000614258 4248 ntBASIC12.62□□□□□ -0.39
HTR5AP47898 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HTR5AP47898 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HTR5AP47898 REXO1L6P-201ENST00000603433 1515 ntBASIC12.62□□□□□ -0.39
HTR5AP47898 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
HTR5AP47898 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HTR5AP47898 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HTR5AP47898 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.62□□□□□ -0.39
HTR5AP47898 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC12.62□□□□□ -0.39
HTR5AP47898 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.62□□□□□ -0.39
HTR5AP47898 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HTR5AP47898 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
HTR5AP47898 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HTR5AP47898 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HTR5AP47898 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
HTR5AP47898 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms