Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC13.14□□□□□ -0.31
RFC3P40938 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
RFC3P40938 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
RFC3P40938 NEU3-205ENST00000531619 582 ntTSL 5 BASIC13.14□□□□□ -0.31
RFC3P40938 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RFC3P40938 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC13.14□□□□□ -0.31
RFC3P40938 NAT9-220ENST00000582870 896 ntTSL 5 BASIC13.14□□□□□ -0.31
RFC3P40938 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.14□□□□□ -0.31
RFC3P40938 MIR3188-201ENST00000583494 85 ntBASIC13.14□□□□□ -0.31
RFC3P40938 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC13.14□□□□□ -0.31
RFC3P40938 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC13.14□□□□□ -0.31
RFC3P40938 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
RFC3P40938 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RFC3P40938 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
RFC3P40938 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RFC3P40938 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.14□□□□□ -0.31
RFC3P40938 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RFC3P40938 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RFC3P40938 AP002353.1-201ENST00000528257 1599 ntBASIC13.14□□□□□ -0.31
RFC3P40938 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.14□□□□□ -0.31
RFC3P40938 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.14□□□□□ -0.31
RFC3P40938 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RFC3P40938 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
RFC3P40938 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RFC3P40938 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.14□□□□□ -0.31
RFC3P40938 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.14□□□□□ -0.31
RFC3P40938 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RFC3P40938 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RFC3P40938 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.14□□□□□ -0.31
RFC3P40938 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RFC3P40938 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.14□□□□□ -0.31
RFC3P40938 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RFC3P40938 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RFC3P40938 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RFC3P40938 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RFC3P40938 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RFC3P40938 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
RFC3P40938 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.13□□□□□ -0.31
RFC3P40938 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RFC3P40938 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RFC3P40938 MYADML-201ENST00000474610 2147 ntBASIC13.13□□□□□ -0.31
RFC3P40938 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
RFC3P40938 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.13□□□□□ -0.31
RFC3P40938 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.13□□□□□ -0.31
RFC3P40938 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RFC3P40938 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.13□□□□□ -0.31
RFC3P40938 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
RFC3P40938 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RFC3P40938 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RFC3P40938 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RFC3P40938 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
RFC3P40938 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RFC3P40938 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RFC3P40938 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RFC3P40938 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.13□□□□□ -0.31
RFC3P40938 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC13.13□□□□□ -0.31
RFC3P40938 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RFC3P40938 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC13.13□□□□□ -0.31
RFC3P40938 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RFC3P40938 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.13□□□□□ -0.31
RFC3P40938 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RFC3P40938 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
RFC3P40938 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RFC3P40938 AP000356.3-201ENST00000382243 753 ntBASIC13.13□□□□□ -0.31
RFC3P40938 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
RFC3P40938 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC13.13□□□□□ -0.31
RFC3P40938 DUX4L50-201ENST00000455245 715 ntBASIC13.13□□□□□ -0.31
RFC3P40938 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RFC3P40938 RN7SL258P-201ENST00000478664 300 ntBASIC13.13□□□□□ -0.31
RFC3P40938 LY6E-208ENST00000520531 490 ntTSL 2 BASIC13.13□□□□□ -0.31
RFC3P40938 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC13.13□□□□□ -0.31
RFC3P40938 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RFC3P40938 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
RFC3P40938 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC13.13□□□□□ -0.31
RFC3P40938 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RFC3P40938 PHBP15-201ENST00000574228 665 ntBASIC13.13□□□□□ -0.31
RFC3P40938 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC13.13□□□□□ -0.31
RFC3P40938 AL022334.2-201ENST00000610000 484 ntBASIC13.13□□□□□ -0.31
RFC3P40938 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC13.13□□□□□ -0.31
RFC3P40938 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC13.13□□□□□ -0.31
RFC3P40938 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RFC3P40938 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.13□□□□□ -0.31
RFC3P40938 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
RFC3P40938 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
RFC3P40938 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
RFC3P40938 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
RFC3P40938 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RFC3P40938 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RFC3P40938 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RFC3P40938 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.13□□□□□ -0.31
RFC3P40938 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.13□□□□□ -0.31
RFC3P40938 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
RFC3P40938 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RFC3P40938 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
RFC3P40938 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC13.13□□□□□ -0.31
RFC3P40938 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
RFC3P40938 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RFC3P40938 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RFC3P40938 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.13□□□□□ -0.31
RFC3P40938 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms