Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 MIR4741-201ENST00000579822 90 ntBASIC14.58□□□□□ -0.08
FDFT1P37268 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.58□□□□□ -0.08
FDFT1P37268 AP000346.4-201ENST00000614827 381 ntBASIC14.58□□□□□ -0.08
FDFT1P37268 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
FDFT1P37268 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC14.58□□□□□ -0.08
FDFT1P37268 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
FDFT1P37268 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.58□□□□□ -0.08
FDFT1P37268 USP39-220ENST00000613444 2161 ntTSL 2 BASIC14.58□□□□□ -0.08
FDFT1P37268 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.58□□□□□ -0.08
FDFT1P37268 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
FDFT1P37268 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
FDFT1P37268 SHMT1P1-201ENST00000419974 1312 ntBASIC14.58□□□□□ -0.08
FDFT1P37268 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
FDFT1P37268 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
FDFT1P37268 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.58□□□□□ -0.08
FDFT1P37268 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
FDFT1P37268 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.58□□□□□ -0.08
FDFT1P37268 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
FDFT1P37268 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.58□□□□□ -0.08
FDFT1P37268 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
FDFT1P37268 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.58□□□□□ -0.08
FDFT1P37268 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
FDFT1P37268 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
FDFT1P37268 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
FDFT1P37268 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
FDFT1P37268 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
FDFT1P37268 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
FDFT1P37268 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
FDFT1P37268 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
FDFT1P37268 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
FDFT1P37268 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC14.57□□□□□ -0.08
FDFT1P37268 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
FDFT1P37268 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
FDFT1P37268 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC14.57□□□□□ -0.08
FDFT1P37268 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
FDFT1P37268 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
FDFT1P37268 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
FDFT1P37268 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
FDFT1P37268 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
FDFT1P37268 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
FDFT1P37268 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
FDFT1P37268 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
FDFT1P37268 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
FDFT1P37268 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
FDFT1P37268 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
FDFT1P37268 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
FDFT1P37268 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
FDFT1P37268 AL391647.1-201ENST00000395664 511 ntBASIC14.57□□□□□ -0.08
FDFT1P37268 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.57□□□□□ -0.08
FDFT1P37268 AC099336.1-201ENST00000417053 1171 ntBASIC14.57□□□□□ -0.08
FDFT1P37268 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.57□□□□□ -0.08
FDFT1P37268 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.57□□□□□ -0.08
FDFT1P37268 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.57□□□□□ -0.08
FDFT1P37268 U91328.1-201ENST00000437528 223 ntBASIC14.57□□□□□ -0.08
FDFT1P37268 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
FDFT1P37268 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
FDFT1P37268 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.57□□□□□ -0.08
FDFT1P37268 SNX29P1-201ENST00000548357 1007 ntBASIC14.57□□□□□ -0.08
FDFT1P37268 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.57□□□□□ -0.08
FDFT1P37268 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
FDFT1P37268 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.57□□□□□ -0.08
FDFT1P37268 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
FDFT1P37268 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC14.57□□□□□ -0.08
FDFT1P37268 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
FDFT1P37268 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
FDFT1P37268 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
FDFT1P37268 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
FDFT1P37268 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
FDFT1P37268 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
FDFT1P37268 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.57□□□□□ -0.08
FDFT1P37268 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
FDFT1P37268 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
FDFT1P37268 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
FDFT1P37268 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
FDFT1P37268 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
FDFT1P37268 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
FDFT1P37268 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.57□□□□□ -0.08
FDFT1P37268 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
FDFT1P37268 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC14.57□□□□□ -0.08
FDFT1P37268 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
FDFT1P37268 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
FDFT1P37268 RCC2P1-201ENST00000452257 1476 ntBASIC14.57□□□□□ -0.08
FDFT1P37268 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
FDFT1P37268 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
FDFT1P37268 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
FDFT1P37268 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
FDFT1P37268 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
FDFT1P37268 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
FDFT1P37268 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.56□□□□□ -0.08
FDFT1P37268 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
FDFT1P37268 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
FDFT1P37268 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC14.56□□□□□ -0.08
FDFT1P37268 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.56□□□□□ -0.08
FDFT1P37268 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
FDFT1P37268 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
FDFT1P37268 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
FDFT1P37268 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
FDFT1P37268 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
FDFT1P37268 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
FDFT1P37268 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms