Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
VARSP26640 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.18□□□□□ -0.14
VARSP26640 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.18□□□□□ -0.14
VARSP26640 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.18□□□□□ -0.14
VARSP26640 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC14.18□□□□□ -0.14
VARSP26640 HOMER2P2-201ENST00000451621 847 ntBASIC14.18□□□□□ -0.14
VARSP26640 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VARSP26640 CICP12-201ENST00000455801 843 ntBASIC14.18□□□□□ -0.14
VARSP26640 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.18□□□□□ -0.14
VARSP26640 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VARSP26640 AC004672.2-201ENST00000537181 574 ntTSL 2 BASIC14.18□□□□□ -0.14
VARSP26640 RERG-205ENST00000537647 935 ntTSL 2 BASIC14.18□□□□□ -0.14
VARSP26640 Metazoa_SRP.12-201ENST00000553249 268 ntBASIC14.18□□□□□ -0.14
VARSP26640 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.18□□□□□ -0.14
VARSP26640 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VARSP26640 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.18□□□□□ -0.14
VARSP26640 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VARSP26640 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.18□□□□□ -0.14
VARSP26640 AL136301.1-201ENST00000615830 422 ntBASIC14.18□□□□□ -0.14
VARSP26640 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.18□□□□□ -0.14
VARSP26640 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.18□□□□□ -0.14
VARSP26640 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.18□□□□□ -0.14
VARSP26640 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.18□□□□□ -0.14
VARSP26640 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VARSP26640 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
VARSP26640 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VARSP26640 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.18□□□□□ -0.14
VARSP26640 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VARSP26640 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VARSP26640 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VARSP26640 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VARSP26640 KRT8P28-201ENST00000433288 1390 ntBASIC14.18□□□□□ -0.14
VARSP26640 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
VARSP26640 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VARSP26640 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
VARSP26640 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VARSP26640 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
VARSP26640 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VARSP26640 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VARSP26640 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
VARSP26640 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
VARSP26640 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VARSP26640 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VARSP26640 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VARSP26640 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.17□□□□□ -0.14
VARSP26640 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.17□□□□□ -0.14
VARSP26640 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
VARSP26640 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
VARSP26640 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VARSP26640 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
VARSP26640 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VARSP26640 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
VARSP26640 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
VARSP26640 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.17□□□□□ -0.14
VARSP26640 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VARSP26640 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.17□□□□□ -0.14
VARSP26640 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VARSP26640 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VARSP26640 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VARSP26640 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VARSP26640 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VARSP26640 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VARSP26640 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VARSP26640 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VARSP26640 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
VARSP26640 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VARSP26640 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.17□□□□□ -0.14
VARSP26640 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.17□□□□□ -0.14
VARSP26640 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VARSP26640 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
VARSP26640 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VARSP26640 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
VARSP26640 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VARSP26640 AKR7A2P1-201ENST00000460134 915 ntBASIC14.17□□□□□ -0.14
VARSP26640 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.17□□□□□ -0.14
VARSP26640 TMEM198B-204ENST00000484016 896 ntBASIC14.17□□□□□ -0.14
VARSP26640 AC091804.1-201ENST00000486888 567 ntBASIC14.17□□□□□ -0.14
VARSP26640 SCARNA20.5-201ENST00000516991 142 ntBASIC14.17□□□□□ -0.14
VARSP26640 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.17□□□□□ -0.14
VARSP26640 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
VARSP26640 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.17□□□□□ -0.14
VARSP26640 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.17□□□□□ -0.14
VARSP26640 RHOQP1-201ENST00000555758 579 ntBASIC14.17□□□□□ -0.14
VARSP26640 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.17□□□□□ -0.14
VARSP26640 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VARSP26640 AP001442.1-203ENST00000596385 876 ntTSL 5 BASIC14.17□□□□□ -0.14
VARSP26640 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VARSP26640 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.17□□□□□ -0.14
VARSP26640 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VARSP26640 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
VARSP26640 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VARSP26640 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
VARSP26640 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VARSP26640 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.17□□□□□ -0.14
VARSP26640 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.17□□□□□ -0.14
VARSP26640 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
VARSP26640 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VARSP26640 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
VARSP26640 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VARSP26640 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms