Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TPM2P07951 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TPM2P07951 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TPM2P07951 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TPM2P07951 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC16.35■□□□□ 0.21
TPM2P07951 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TPM2P07951 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC16.35■□□□□ 0.21
TPM2P07951 AC022400.8-201ENST00000623453 3599 ntBASIC16.35■□□□□ 0.21
TPM2P07951 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC16.35■□□□□ 0.21
TPM2P07951 AC090643.2-201ENST00000623442 2029 ntBASIC16.35■□□□□ 0.21
TPM2P07951 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TPM2P07951 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
TPM2P07951 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TPM2P07951 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.35■□□□□ 0.21
TPM2P07951 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.35■□□□□ 0.21
TPM2P07951 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.35■□□□□ 0.21
TPM2P07951 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TPM2P07951 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.35■□□□□ 0.21
TPM2P07951 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.35■□□□□ 0.21
TPM2P07951 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.35■□□□□ 0.21
TPM2P07951 AC009118.2-201ENST00000613275 655 ntBASIC16.35■□□□□ 0.21
TPM2P07951 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.35■□□□□ 0.21
TPM2P07951 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TPM2P07951 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TPM2P07951 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TPM2P07951 SLC7A15P-201ENST00000424028 1363 ntBASIC16.35■□□□□ 0.21
TPM2P07951 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TPM2P07951 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TPM2P07951 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
TPM2P07951 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TPM2P07951 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TPM2P07951 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC16.35■□□□□ 0.21
TPM2P07951 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC16.34■□□□□ 0.21
TPM2P07951 MYADML-201ENST00000474610 2147 ntBASIC16.34■□□□□ 0.21
TPM2P07951 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM2P07951 AC027369.3-201ENST00000530465 3707 ntBASIC16.34■□□□□ 0.21
TPM2P07951 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM2P07951 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
TPM2P07951 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC16.34■□□□□ 0.21
TPM2P07951 NMRAL2P-204ENST00000423298 1792 ntTSL 5 BASIC16.34■□□□□ 0.21
TPM2P07951 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TPM2P07951 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM2P07951 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TPM2P07951 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM2P07951 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM2P07951 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM2P07951 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM2P07951 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
TPM2P07951 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TPM2P07951 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM2P07951 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.34■□□□□ 0.21
TPM2P07951 GNAQP1-201ENST00000444815 1067 ntBASIC16.34■□□□□ 0.21
TPM2P07951 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.34■□□□□ 0.21
TPM2P07951 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.34■□□□□ 0.21
TPM2P07951 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.34■□□□□ 0.21
TPM2P07951 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
TPM2P07951 AC124283.3-201ENST00000570869 594 ntBASIC16.34■□□□□ 0.21
TPM2P07951 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM2P07951 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
TPM2P07951 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM2P07951 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.34■□□□□ 0.21
TPM2P07951 MIR6074-201ENST00000612054 107 ntBASIC16.34■□□□□ 0.21
TPM2P07951 AC004790.1-201ENST00000612686 536 ntBASIC16.34■□□□□ 0.21
TPM2P07951 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.34■□□□□ 0.21
TPM2P07951 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
TPM2P07951 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM2P07951 MRPL37P1-201ENST00000592451 1337 ntBASIC16.34■□□□□ 0.21
TPM2P07951 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TPM2P07951 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM2P07951 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TPM2P07951 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TPM2P07951 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC16.34■□□□□ 0.21
TPM2P07951 DDX12P-201ENST00000432996 2947 ntBASIC16.34■□□□□ 0.21
TPM2P07951 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC16.34■□□□□ 0.21
TPM2P07951 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM2P07951 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
TPM2P07951 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TPM2P07951 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM2P07951 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TPM2P07951 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TPM2P07951 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TPM2P07951 AC145098.2-201ENST00000623593 3026 ntBASIC16.33■□□□□ 0.21
TPM2P07951 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TPM2P07951 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TPM2P07951 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TPM2P07951 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TPM2P07951 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TPM2P07951 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TPM2P07951 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.33■□□□□ 0.2
TPM2P07951 MRPS18AP1-201ENST00000414458 589 ntBASIC16.33■□□□□ 0.2
TPM2P07951 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC16.33■□□□□ 0.2
TPM2P07951 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.33■□□□□ 0.2
TPM2P07951 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.33■□□□□ 0.2
TPM2P07951 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.33■□□□□ 0.2
TPM2P07951 RNA5SP421-201ENST00000516864 134 ntBASIC16.33■□□□□ 0.2
TPM2P07951 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
TPM2P07951 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TPM2P07951 AL359711.2-201ENST00000563105 872 ntBASIC16.33■□□□□ 0.2
TPM2P07951 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC16.33■□□□□ 0.2
TPM2P07951 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms