Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD4P01730 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD4P01730 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD4P01730 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CD4P01730 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD4P01730 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CD4P01730 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CD4P01730 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD4P01730 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD4P01730 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.64■□□□□ 0.09
CD4P01730 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD4P01730 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD4P01730 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CD4P01730 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CD4P01730 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD4P01730 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CD4P01730 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC15.63■□□□□ 0.09
CD4P01730 PHB-210ENST00000511832 1509 ntTSL 2 BASIC15.63■□□□□ 0.09
CD4P01730 INTS4P1-203ENST00000641008 3683 ntBASIC15.63■□□□□ 0.09
CD4P01730 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CD4P01730 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CD4P01730 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
CD4P01730 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.63■□□□□ 0.09
CD4P01730 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CD4P01730 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CD4P01730 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CD4P01730 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CD4P01730 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CD4P01730 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC15.63■□□□□ 0.09
CD4P01730 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CD4P01730 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CD4P01730 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CD4P01730 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CD4P01730 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CD4P01730 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CD4P01730 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CD4P01730 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC15.63■□□□□ 0.09
CD4P01730 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CD4P01730 VENTXP4-201ENST00000449029 958 ntBASIC15.63■□□□□ 0.09
CD4P01730 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC15.63■□□□□ 0.09
CD4P01730 RBM4-207ENST00000506523 654 ntTSL 3 BASIC15.63■□□□□ 0.09
CD4P01730 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC15.63■□□□□ 0.09
CD4P01730 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CD4P01730 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC15.63■□□□□ 0.09
CD4P01730 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CD4P01730 AC092862.1-201ENST00000541534 533 ntBASIC15.63■□□□□ 0.09
CD4P01730 AC068831.5-201ENST00000557387 328 ntBASIC15.63■□□□□ 0.09
CD4P01730 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC15.63■□□□□ 0.09
CD4P01730 MIR4265-201ENST00000582152 99 ntBASIC15.63■□□□□ 0.09
CD4P01730 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC15.63■□□□□ 0.09
CD4P01730 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CD4P01730 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC15.63■□□□□ 0.09
CD4P01730 AC104506.1-201ENST00000609247 429 ntBASIC15.63■□□□□ 0.09
CD4P01730 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CD4P01730 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CD4P01730 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CD4P01730 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CD4P01730 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC15.63■□□□□ 0.09
CD4P01730 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CD4P01730 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
CD4P01730 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CD4P01730 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC15.63■□□□□ 0.09
CD4P01730 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CD4P01730 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CD4P01730 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CD4P01730 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CD4P01730 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CD4P01730 AL109809.1-201ENST00000418979 1367 ntBASIC15.62■□□□□ 0.09
CD4P01730 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CD4P01730 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CD4P01730 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.62■□□□□ 0.09
CD4P01730 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CD4P01730 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CD4P01730 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CD4P01730 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CD4P01730 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CD4P01730 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
CD4P01730 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CD4P01730 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.62■□□□□ 0.09
CD4P01730 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
CD4P01730 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.62■□□□□ 0.09
CD4P01730 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.62■□□□□ 0.09
CD4P01730 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CD4P01730 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC15.62■□□□□ 0.09
CD4P01730 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
CD4P01730 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CD4P01730 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC15.62■□□□□ 0.09
CD4P01730 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC15.62■□□□□ 0.09
CD4P01730 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
CD4P01730 OR7E115P-201ENST00000382617 1024 ntBASIC15.62■□□□□ 0.09
CD4P01730 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CD4P01730 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC15.62■□□□□ 0.09
CD4P01730 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CD4P01730 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC15.62■□□□□ 0.09
CD4P01730 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC15.62■□□□□ 0.09
CD4P01730 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC15.62■□□□□ 0.09
CD4P01730 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC15.62■□□□□ 0.09
CD4P01730 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC15.62■□□□□ 0.09
CD4P01730 PRSS3P1-201ENST00000503996 742 ntBASIC15.62■□□□□ 0.09
CD4P01730 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms