Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
SMAD6O43541 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC14.33□□□□□ -0.12
SMAD6O43541 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
SMAD6O43541 MIR3147-201ENST00000577811 66 ntBASIC14.33□□□□□ -0.12
SMAD6O43541 AC092171.5-201ENST00000608012 942 ntBASIC14.33□□□□□ -0.12
SMAD6O43541 AC018635.2-201ENST00000608625 364 ntBASIC14.33□□□□□ -0.12
SMAD6O43541 MIR6842-201ENST00000612539 65 ntBASIC14.33□□□□□ -0.12
SMAD6O43541 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC14.33□□□□□ -0.12
SMAD6O43541 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC14.33□□□□□ -0.12
SMAD6O43541 AP001184.1-201ENST00000637936 376 ntBASIC14.33□□□□□ -0.12
SMAD6O43541 OR2I1P-209ENST00000641730 5365 ntBASIC14.33□□□□□ -0.12
SMAD6O43541 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMAD6O43541 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.33□□□□□ -0.12
SMAD6O43541 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.33□□□□□ -0.12
SMAD6O43541 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMAD6O43541 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMAD6O43541 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMAD6O43541 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMAD6O43541 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMAD6O43541 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC14.33□□□□□ -0.12
SMAD6O43541 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMAD6O43541 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SMAD6O43541 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMAD6O43541 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SMAD6O43541 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
SMAD6O43541 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC14.33□□□□□ -0.12
SMAD6O43541 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.33□□□□□ -0.12
SMAD6O43541 AL928654.5-201ENST00000624831 2501 ntBASIC14.33□□□□□ -0.12
SMAD6O43541 GOLGA8EP-201ENST00000530246 1959 ntBASIC14.33□□□□□ -0.12
SMAD6O43541 KRT8P18-201ENST00000413425 1445 ntBASIC14.32□□□□□ -0.12
SMAD6O43541 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC14.32□□□□□ -0.12
SMAD6O43541 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC14.32□□□□□ -0.12
SMAD6O43541 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.32□□□□□ -0.12
SMAD6O43541 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMAD6O43541 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SMAD6O43541 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMAD6O43541 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.32□□□□□ -0.12
SMAD6O43541 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SMAD6O43541 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SMAD6O43541 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC14.32□□□□□ -0.12
SMAD6O43541 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SMAD6O43541 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMAD6O43541 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMAD6O43541 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SMAD6O43541 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.32□□□□□ -0.12
SMAD6O43541 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SMAD6O43541 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMAD6O43541 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMAD6O43541 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMAD6O43541 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMAD6O43541 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC14.32□□□□□ -0.12
SMAD6O43541 SAT1-201ENST00000379251 801 ntTSL 2 BASIC14.32□□□□□ -0.12
SMAD6O43541 SAT1-202ENST00000379253 909 ntTSL 2 BASIC14.32□□□□□ -0.12
SMAD6O43541 SAT1-203ENST00000379254 868 ntTSL 3 BASIC14.32□□□□□ -0.12
SMAD6O43541 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMAD6O43541 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMAD6O43541 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC14.32□□□□□ -0.12
SMAD6O43541 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMAD6O43541 DNAJB1P1-201ENST00000429417 1024 ntBASIC14.32□□□□□ -0.12
SMAD6O43541 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC14.32□□□□□ -0.12
SMAD6O43541 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC14.32□□□□□ -0.12
SMAD6O43541 AC078991.1-201ENST00000437297 610 ntBASIC14.32□□□□□ -0.12
SMAD6O43541 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC14.32□□□□□ -0.12
SMAD6O43541 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC14.32□□□□□ -0.12
SMAD6O43541 RN7SL81P-201ENST00000493781 261 ntBASIC14.32□□□□□ -0.12
SMAD6O43541 SLC25A15P3-201ENST00000505530 290 ntBASIC14.32□□□□□ -0.12
SMAD6O43541 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC14.32□□□□□ -0.12
SMAD6O43541 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC14.32□□□□□ -0.12
SMAD6O43541 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMAD6O43541 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMAD6O43541 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC14.32□□□□□ -0.12
SMAD6O43541 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC14.32□□□□□ -0.12
SMAD6O43541 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC14.32□□□□□ -0.12
SMAD6O43541 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC14.32□□□□□ -0.12
SMAD6O43541 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC14.32□□□□□ -0.12
SMAD6O43541 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMAD6O43541 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMAD6O43541 TEKT4P2-202ENST00000559466 1312 ntBASIC14.32□□□□□ -0.12
SMAD6O43541 PKD1P5-201ENST00000532415 10291 ntBASIC14.32□□□□□ -0.12
SMAD6O43541 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMAD6O43541 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SMAD6O43541 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SMAD6O43541 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMAD6O43541 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SMAD6O43541 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMAD6O43541 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.32□□□□□ -0.12
SMAD6O43541 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SMAD6O43541 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMAD6O43541 AL928921.2-201ENST00000641325 2442 ntBASIC14.32□□□□□ -0.12
SMAD6O43541 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SMAD6O43541 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SMAD6O43541 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SMAD6O43541 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC14.31□□□□□ -0.12
SMAD6O43541 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SMAD6O43541 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.31□□□□□ -0.12
SMAD6O43541 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SMAD6O43541 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SMAD6O43541 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SMAD6O43541 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SMAD6O43541 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 298.2 ms