Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RIMBP3Q9UFD9 FKBP1A-201ENST00000381715 705 ntTSL 2 BASIC21.4■■□□□ 1.02
RIMBP3Q9UFD9 RN7SL309P-201ENST00000491364 286 ntBASIC21.4■■□□□ 1.02
RIMBP3Q9UFD9 RN7SL833P-201ENST00000498758 284 ntBASIC21.4■■□□□ 1.02
RIMBP3Q9UFD9 COPZ1-206ENST00000549043 1232 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RIMBP3Q9UFD9 AC018362.2-202ENST00000567089 562 ntTSL 3 BASIC21.4■■□□□ 1.02
RIMBP3Q9UFD9 PSMD7-205ENST00000568615 931 ntTSL 2 BASIC21.4■■□□□ 1.02
RIMBP3Q9UFD9 AC097634.2-201ENST00000615819 604 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RIMBP3Q9UFD9 AC006581.2-201ENST00000631830 455 ntTSL 3 BASIC21.4■■□□□ 1.02
RIMBP3Q9UFD9 AL513478.3-201ENST00000641038 1095 ntBASIC21.4■■□□□ 1.02
RIMBP3Q9UFD9 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RIMBP3Q9UFD9 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
RIMBP3Q9UFD9 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
RIMBP3Q9UFD9 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC21.39■■□□□ 1.02
RIMBP3Q9UFD9 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RIMBP3Q9UFD9 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC21.39■■□□□ 1.02
RIMBP3Q9UFD9 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC21.39■■□□□ 1.02
RIMBP3Q9UFD9 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
RIMBP3Q9UFD9 DHRS1-202ENST00000396813 1470 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
RIMBP3Q9UFD9 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RIMBP3Q9UFD9 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RIMBP3Q9UFD9 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
RIMBP3Q9UFD9 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RIMBP3Q9UFD9 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
RIMBP3Q9UFD9 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RIMBP3Q9UFD9 RN7SKP255-201ENST00000363442 313 ntBASIC21.39■■□□□ 1.01
RIMBP3Q9UFD9 RN7SKP203-201ENST00000363618 332 ntBASIC21.39■■□□□ 1.01
RIMBP3Q9UFD9 RN7SKP71-201ENST00000364558 318 ntBASIC21.39■■□□□ 1.01
RIMBP3Q9UFD9 7SK.1-201ENST00000365328 331 ntBASIC21.39■■□□□ 1.01
RIMBP3Q9UFD9 APOBEC3H-203ENST00000421988 592 ntTSL 5 BASIC21.39■■□□□ 1.01
RIMBP3Q9UFD9 DAPK1-IT1-201ENST00000431813 702 ntTSL 3 BASIC21.39■■□□□ 1.01
RIMBP3Q9UFD9 AC073472.1-201ENST00000441433 803 ntBASIC21.39■■□□□ 1.01
RIMBP3Q9UFD9 RN7SL756P-201ENST00000488739 268 ntBASIC21.39■■□□□ 1.01
RIMBP3Q9UFD9 AC110753.1-201ENST00000505711 1022 ntBASIC21.39■■□□□ 1.01
RIMBP3Q9UFD9 RAD52-212ENST00000541619 560 ntTSL 4 BASIC21.39■■□□□ 1.01
RIMBP3Q9UFD9 AC109460.2-202ENST00000568057 573 ntTSL 3 BASIC21.39■■□□□ 1.01
RIMBP3Q9UFD9 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
RIMBP3Q9UFD9 MIR6074-201ENST00000612054 107 ntBASIC21.39■■□□□ 1.01
RIMBP3Q9UFD9 MIR6750-201ENST00000617817 75 ntBASIC21.39■■□□□ 1.01
RIMBP3Q9UFD9 AL669831.6-201ENST00000635557 837 ntBASIC21.39■■□□□ 1.01
RIMBP3Q9UFD9 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC21.39■■□□□ 1.01
RIMBP3Q9UFD9 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
RIMBP3Q9UFD9 AC124319.4-201ENST00000622931 2161 ntBASIC21.39■■□□□ 1.01
RIMBP3Q9UFD9 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC21.39■■□□□ 1.01
RIMBP3Q9UFD9 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RIMBP3Q9UFD9 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RIMBP3Q9UFD9 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
RIMBP3Q9UFD9 RCC2P5-201ENST00000492126 1487 ntBASIC21.38■■□□□ 1.01
RIMBP3Q9UFD9 RACK1-227ENST00000512805 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RIMBP3Q9UFD9 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RIMBP3Q9UFD9 MEG8-220ENST00000636052 1369 ntTSL 5 BASIC21.38■■□□□ 1.01
RIMBP3Q9UFD9 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
RIMBP3Q9UFD9 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RIMBP3Q9UFD9 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RIMBP3Q9UFD9 KRTAP12-4-201ENST00000391618 447 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
RIMBP3Q9UFD9 SERF2-204ENST00000402131 586 ntTSL 2 BASIC21.38■■□□□ 1.01
RIMBP3Q9UFD9 LINC01678-202ENST00000424921 475 ntTSL 3 BASIC21.38■■□□□ 1.01
RIMBP3Q9UFD9 RPL10P12-201ENST00000427342 318 ntBASIC21.38■■□□□ 1.01
RIMBP3Q9UFD9 TMX3-202ENST00000443099 913 ntTSL 2 BASIC21.38■■□□□ 1.01
RIMBP3Q9UFD9 ATP2A2-211ENST00000552636 529 ntTSL 4 BASIC21.38■■□□□ 1.01
RIMBP3Q9UFD9 ERH-202ENST00000555373 586 ntTSL 2 BASIC21.38■■□□□ 1.01
RIMBP3Q9UFD9 AC015563.2-201ENST00000579580 772 ntTSL 3 BASIC21.38■■□□□ 1.01
RIMBP3Q9UFD9 TRMT112P6-201ENST00000599234 372 ntBASIC21.38■■□□□ 1.01
RIMBP3Q9UFD9 NOP16-210ENST00000619979 963 ntTSL 5 BASIC21.38■■□□□ 1.01
RIMBP3Q9UFD9 AC012186.3-201ENST00000623850 485 ntBASIC21.38■■□□□ 1.01
RIMBP3Q9UFD9 SPDL1-216ENST00000629457 340 ntTSL 5 BASIC21.38■■□□□ 1.01
RIMBP3Q9UFD9 AC092471.2-201ENST00000637219 651 ntBASIC21.38■■□□□ 1.01
RIMBP3Q9UFD9 AC020763.4-201ENST00000623414 4170 ntBASIC21.38■■□□□ 1.01
RIMBP3Q9UFD9 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
RIMBP3Q9UFD9 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RIMBP3Q9UFD9 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RIMBP3Q9UFD9 AC006486.2-201ENST00000624246 2199 ntBASIC21.38■■□□□ 1.01
RIMBP3Q9UFD9 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RIMBP3Q9UFD9 HP-203ENST00000357763 1482 ntTSL 5 BASIC21.38■■□□□ 1.01
RIMBP3Q9UFD9 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC21.38■■□□□ 1.01
RIMBP3Q9UFD9 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
RIMBP3Q9UFD9 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RIMBP3Q9UFD9 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RIMBP3Q9UFD9 HFE-204ENST00000349999 1704 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RIMBP3Q9UFD9 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
RIMBP3Q9UFD9 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
RIMBP3Q9UFD9 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RIMBP3Q9UFD9 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RIMBP3Q9UFD9 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC21.37■■□□□ 1.01
RIMBP3Q9UFD9 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RIMBP3Q9UFD9 AC020658.6-201ENST00000623564 1870 ntBASIC21.37■■□□□ 1.01
RIMBP3Q9UFD9 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RIMBP3Q9UFD9 OBP2A-203ENST00000371776 689 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RIMBP3Q9UFD9 ZNF589-202ENST00000412564 593 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RIMBP3Q9UFD9 ATP6AP2-202ENST00000423649 1093 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
RIMBP3Q9UFD9 AL355987.2-201ENST00000471502 561 ntTSL 4 BASIC21.37■■□□□ 1.01
RIMBP3Q9UFD9 CLDND1-223ENST00000511081 642 ntTSL 2 BASIC21.37■■□□□ 1.01
RIMBP3Q9UFD9 FAM86B1-215ENST00000533513 725 ntTSL 5 BASIC21.37■■□□□ 1.01
RIMBP3Q9UFD9 LINC00923-208ENST00000621777 503 ntTSL 5 BASIC21.37■■□□□ 1.01
RIMBP3Q9UFD9 AC115618.3-201ENST00000623114 425 ntBASIC21.37■■□□□ 1.01
RIMBP3Q9UFD9 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RIMBP3Q9UFD9 SCARB2-202ENST00000452464 1495 ntTSL 2 BASIC21.37■■□□□ 1.01
RIMBP3Q9UFD9 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RIMBP3Q9UFD9 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RIMBP3Q9UFD9 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms