Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC13.14□□□□□ -0.31
LRFN1Q9P244 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC13.14□□□□□ -0.31
LRFN1Q9P244 LDHBP1-201ENST00000455730 1119 ntBASIC13.14□□□□□ -0.31
LRFN1Q9P244 FTH1P22-201ENST00000456305 520 ntBASIC13.14□□□□□ -0.31
LRFN1Q9P244 CHCHD2P9-201ENST00000461726 456 ntBASIC13.14□□□□□ -0.31
LRFN1Q9P244 RN7SL181P-201ENST00000462921 277 ntBASIC13.14□□□□□ -0.31
LRFN1Q9P244 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC13.14□□□□□ -0.31
LRFN1Q9P244 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LRFN1Q9P244 AL031713.1-201ENST00000564813 661 ntBASIC13.14□□□□□ -0.31
LRFN1Q9P244 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRFN1Q9P244 MIR5572-201ENST00000583188 137 ntBASIC13.14□□□□□ -0.31
LRFN1Q9P244 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC13.14□□□□□ -0.31
LRFN1Q9P244 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC13.14□□□□□ -0.31
LRFN1Q9P244 AC104506.1-201ENST00000609247 429 ntBASIC13.14□□□□□ -0.31
LRFN1Q9P244 AC073352.2-201ENST00000609385 439 ntBASIC13.14□□□□□ -0.31
LRFN1Q9P244 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LRFN1Q9P244 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
LRFN1Q9P244 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRFN1Q9P244 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRFN1Q9P244 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
LRFN1Q9P244 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LRFN1Q9P244 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRFN1Q9P244 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LRFN1Q9P244 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRFN1Q9P244 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
LRFN1Q9P244 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRFN1Q9P244 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
LRFN1Q9P244 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
LRFN1Q9P244 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRFN1Q9P244 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRFN1Q9P244 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRFN1Q9P244 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRFN1Q9P244 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRFN1Q9P244 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRFN1Q9P244 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
LRFN1Q9P244 AC011498.7-201ENST00000624986 2027 ntBASIC13.13□□□□□ -0.31
LRFN1Q9P244 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.13□□□□□ -0.31
LRFN1Q9P244 KC6-207ENST00000600644 2311 ntTSL 3 BASIC13.13□□□□□ -0.31
LRFN1Q9P244 AC139749.1-202ENST00000617529 3139 ntBASIC13.13□□□□□ -0.31
LRFN1Q9P244 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
LRFN1Q9P244 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRFN1Q9P244 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
LRFN1Q9P244 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRFN1Q9P244 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.13□□□□□ -0.31
LRFN1Q9P244 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRFN1Q9P244 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.13□□□□□ -0.31
LRFN1Q9P244 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
LRFN1Q9P244 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRFN1Q9P244 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
LRFN1Q9P244 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRFN1Q9P244 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LRFN1Q9P244 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRFN1Q9P244 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRFN1Q9P244 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
LRFN1Q9P244 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LRFN1Q9P244 DNAJB1P1-201ENST00000429417 1024 ntBASIC13.13□□□□□ -0.31
LRFN1Q9P244 AL627422.1-201ENST00000434104 580 ntBASIC13.13□□□□□ -0.31
LRFN1Q9P244 AC078991.1-201ENST00000437297 610 ntBASIC13.13□□□□□ -0.31
LRFN1Q9P244 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LRFN1Q9P244 AC008267.1-201ENST00000474858 1069 ntBASIC13.13□□□□□ -0.31
LRFN1Q9P244 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC13.13□□□□□ -0.31
LRFN1Q9P244 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC13.13□□□□□ -0.31
LRFN1Q9P244 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC13.13□□□□□ -0.31
LRFN1Q9P244 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRFN1Q9P244 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
LRFN1Q9P244 MIR4522-201ENST00000584932 87 ntBASIC13.13□□□□□ -0.31
LRFN1Q9P244 AC087392.5-201ENST00000612517 489 ntBASIC13.13□□□□□ -0.31
LRFN1Q9P244 AC009560.1-201ENST00000620208 434 ntBASIC13.13□□□□□ -0.31
LRFN1Q9P244 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRFN1Q9P244 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
LRFN1Q9P244 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
LRFN1Q9P244 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
LRFN1Q9P244 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.13□□□□□ -0.31
LRFN1Q9P244 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
LRFN1Q9P244 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LRFN1Q9P244 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.13□□□□□ -0.31
LRFN1Q9P244 AL731571.1-201ENST00000617058 5428 ntBASIC13.13□□□□□ -0.31
LRFN1Q9P244 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LRFN1Q9P244 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.13□□□□□ -0.31
LRFN1Q9P244 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRFN1Q9P244 AC026748.1-201ENST00000624349 3251 ntBASIC13.13□□□□□ -0.31
LRFN1Q9P244 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
LRFN1Q9P244 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
LRFN1Q9P244 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRFN1Q9P244 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LRFN1Q9P244 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRFN1Q9P244 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
LRFN1Q9P244 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC13.13□□□□□ -0.31
LRFN1Q9P244 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRFN1Q9P244 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.13□□□□□ -0.31
LRFN1Q9P244 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRFN1Q9P244 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.13□□□□□ -0.31
LRFN1Q9P244 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
LRFN1Q9P244 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.12□□□□□ -0.31
LRFN1Q9P244 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRFN1Q9P244 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.12□□□□□ -0.31
LRFN1Q9P244 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LRFN1Q9P244 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRFN1Q9P244 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.12□□□□□ -0.31
LRFN1Q9P244 CCT8L1P-201ENST00000465400 1674 ntBASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms