Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 CRB3P1-201ENST00000449338 276 ntBASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 AC022217.1-201ENST00000521069 738 ntBASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 AC015936.2-201ENST00000593177 259 ntBASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 ARNTL-202ENST00000401424 2788 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 AL354989.2-201ENST00000435838 1540 ntBASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 AL358781.1-202ENST00000321081 1360 ntBASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 FAM197Y7-201ENST00000432892 766 ntBASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 AC027307.3-201ENST00000594262 1100 ntBASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 AL136301.1-201ENST00000615830 422 ntBASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms