Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC10.92□□□□□ -0.66
VGLL1Q99990 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC10.92□□□□□ -0.66
VGLL1Q99990 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
VGLL1Q99990 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC10.92□□□□□ -0.66
VGLL1Q99990 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
VGLL1Q99990 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
VGLL1Q99990 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
VGLL1Q99990 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
VGLL1Q99990 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
VGLL1Q99990 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
VGLL1Q99990 NCLP1-201ENST00000445357 1963 ntBASIC10.92□□□□□ -0.66
VGLL1Q99990 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC10.92□□□□□ -0.66
VGLL1Q99990 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
VGLL1Q99990 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
VGLL1Q99990 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
VGLL1Q99990 HARS-202ENST00000415192 1401 ntTSL 2 BASIC10.92□□□□□ -0.66
VGLL1Q99990 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
VGLL1Q99990 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
VGLL1Q99990 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
VGLL1Q99990 AL138709.1-201ENST00000614840 1693 ntBASIC10.92□□□□□ -0.66
VGLL1Q99990 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
VGLL1Q99990 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
VGLL1Q99990 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
VGLL1Q99990 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
VGLL1Q99990 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
VGLL1Q99990 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
VGLL1Q99990 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
VGLL1Q99990 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC10.91□□□□□ -0.66
VGLL1Q99990 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
VGLL1Q99990 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
VGLL1Q99990 GOLGA8IP-202ENST00000611635 2100 ntBASIC10.91□□□□□ -0.66
VGLL1Q99990 TSN-212ENST00000536142 3328 ntTSL 2 BASIC10.91□□□□□ -0.66
VGLL1Q99990 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
VGLL1Q99990 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC10.91□□□□□ -0.66
VGLL1Q99990 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
VGLL1Q99990 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC10.91□□□□□ -0.66
VGLL1Q99990 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
VGLL1Q99990 AL445209.1-201ENST00000607269 3491 ntBASIC10.91□□□□□ -0.66
VGLL1Q99990 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
VGLL1Q99990 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
VGLL1Q99990 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
VGLL1Q99990 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
VGLL1Q99990 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
VGLL1Q99990 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
VGLL1Q99990 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
VGLL1Q99990 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
VGLL1Q99990 TPM3P8-201ENST00000330554 643 ntBASIC10.91□□□□□ -0.66
VGLL1Q99990 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
VGLL1Q99990 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
VGLL1Q99990 USP17L6P-201ENST00000382470 1197 ntBASIC10.91□□□□□ -0.66
VGLL1Q99990 AC004945.1-201ENST00000416738 983 ntBASIC10.91□□□□□ -0.66
VGLL1Q99990 AC012441.1-201ENST00000446669 685 ntBASIC10.91□□□□□ -0.66
VGLL1Q99990 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC10.91□□□□□ -0.66
VGLL1Q99990 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
VGLL1Q99990 AC068587.3-201ENST00000526613 355 ntBASIC10.91□□□□□ -0.66
VGLL1Q99990 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC10.91□□□□□ -0.66
VGLL1Q99990 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC10.91□□□□□ -0.66
VGLL1Q99990 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC10.91□□□□□ -0.66
VGLL1Q99990 WASH4P-201ENST00000564273 1246 ntBASIC10.91□□□□□ -0.66
VGLL1Q99990 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC10.91□□□□□ -0.66
VGLL1Q99990 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC10.91□□□□□ -0.66
VGLL1Q99990 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
VGLL1Q99990 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC10.91□□□□□ -0.66
VGLL1Q99990 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
VGLL1Q99990 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC10.91□□□□□ -0.66
VGLL1Q99990 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
VGLL1Q99990 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
VGLL1Q99990 AC004241.5-201ENST00000623870 2448 ntBASIC10.91□□□□□ -0.66
VGLL1Q99990 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
VGLL1Q99990 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
VGLL1Q99990 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC10.91□□□□□ -0.66
VGLL1Q99990 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
VGLL1Q99990 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
VGLL1Q99990 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
VGLL1Q99990 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
VGLL1Q99990 STK25-235ENST00000543554 2556 ntTSL 2 BASIC10.91□□□□□ -0.66
VGLL1Q99990 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
VGLL1Q99990 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
VGLL1Q99990 APPBP2-201ENST00000083182 6478 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
VGLL1Q99990 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
VGLL1Q99990 AC009093.10-201ENST00000641956 1442 ntBASIC10.91□□□□□ -0.66
VGLL1Q99990 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
VGLL1Q99990 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC10.91□□□□□ -0.66
VGLL1Q99990 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
VGLL1Q99990 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
VGLL1Q99990 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
VGLL1Q99990 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC10.91□□□□□ -0.66
VGLL1Q99990 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
VGLL1Q99990 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
VGLL1Q99990 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
VGLL1Q99990 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VGLL1Q99990 AC114271.1-201ENST00000612689 2813 ntBASIC10.9□□□□□ -0.66
VGLL1Q99990 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
VGLL1Q99990 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC10.9□□□□□ -0.66
VGLL1Q99990 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC10.9□□□□□ -0.66
VGLL1Q99990 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC10.9□□□□□ -0.66
VGLL1Q99990 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
VGLL1Q99990 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC10.9□□□□□ -0.66
VGLL1Q99990 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
VGLL1Q99990 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC10.9□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms