Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC16.16■□□□□ 0.18
SYNGAP1Q96PV0 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SYNGAP1Q96PV0 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC16.15■□□□□ 0.18
SYNGAP1Q96PV0 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
SYNGAP1Q96PV0 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SYNGAP1Q96PV0 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SYNGAP1Q96PV0 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SYNGAP1Q96PV0 CCT8L1P-201ENST00000465400 1674 ntBASIC16.15■□□□□ 0.18
SYNGAP1Q96PV0 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
SYNGAP1Q96PV0 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SYNGAP1Q96PV0 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SYNGAP1Q96PV0 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC16.15■□□□□ 0.18
SYNGAP1Q96PV0 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SYNGAP1Q96PV0 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SYNGAP1Q96PV0 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SYNGAP1Q96PV0 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SYNGAP1Q96PV0 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SYNGAP1Q96PV0 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC16.15■□□□□ 0.18
SYNGAP1Q96PV0 LINC00265-2P-201ENST00000413372 782 ntBASIC16.15■□□□□ 0.18
SYNGAP1Q96PV0 BX679664.3-201ENST00000414070 555 ntBASIC16.15■□□□□ 0.18
SYNGAP1Q96PV0 AC113935.1-201ENST00000471722 555 ntBASIC16.15■□□□□ 0.18
SYNGAP1Q96PV0 RN7SL23P-201ENST00000484055 275 ntBASIC16.15■□□□□ 0.18
SYNGAP1Q96PV0 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
SYNGAP1Q96PV0 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC16.15■□□□□ 0.18
SYNGAP1Q96PV0 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SYNGAP1Q96PV0 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC16.15■□□□□ 0.18
SYNGAP1Q96PV0 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SYNGAP1Q96PV0 AC138466.4-201ENST00000623965 852 ntBASIC16.15■□□□□ 0.18
SYNGAP1Q96PV0 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SYNGAP1Q96PV0 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SYNGAP1Q96PV0 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SYNGAP1Q96PV0 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SYNGAP1Q96PV0 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC16.15■□□□□ 0.18
SYNGAP1Q96PV0 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.18
SYNGAP1Q96PV0 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.18
SYNGAP1Q96PV0 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SYNGAP1Q96PV0 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC16.14■□□□□ 0.17
SYNGAP1Q96PV0 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SYNGAP1Q96PV0 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SYNGAP1Q96PV0 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC16.14■□□□□ 0.17
SYNGAP1Q96PV0 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC16.14■□□□□ 0.17
SYNGAP1Q96PV0 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SYNGAP1Q96PV0 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
SYNGAP1Q96PV0 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
SYNGAP1Q96PV0 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SYNGAP1Q96PV0 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SYNGAP1Q96PV0 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC16.14■□□□□ 0.17
SYNGAP1Q96PV0 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.17
SYNGAP1Q96PV0 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC16.14■□□□□ 0.17
SYNGAP1Q96PV0 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SYNGAP1Q96PV0 BX640514.1-201ENST00000583223 1918 ntBASIC16.14■□□□□ 0.17
SYNGAP1Q96PV0 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC16.14■□□□□ 0.17
SYNGAP1Q96PV0 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
SYNGAP1Q96PV0 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SYNGAP1Q96PV0 STK16-203ENST00000409516 895 ntTSL 2 BASIC16.14■□□□□ 0.17
SYNGAP1Q96PV0 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SYNGAP1Q96PV0 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC16.14■□□□□ 0.17
SYNGAP1Q96PV0 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC16.14■□□□□ 0.17
SYNGAP1Q96PV0 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC16.14■□□□□ 0.17
SYNGAP1Q96PV0 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
SYNGAP1Q96PV0 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC16.14■□□□□ 0.17
SYNGAP1Q96PV0 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC16.14■□□□□ 0.17
SYNGAP1Q96PV0 NAMA-206ENST00000605377 509 ntTSL 5 BASIC16.14■□□□□ 0.17
SYNGAP1Q96PV0 AL021707.6-201ENST00000609212 491 ntBASIC16.14■□□□□ 0.17
SYNGAP1Q96PV0 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC16.14■□□□□ 0.17
SYNGAP1Q96PV0 LINC00244-201ENST00000625073 613 ntBASIC16.14■□□□□ 0.17
SYNGAP1Q96PV0 AL451007.2-201ENST00000632004 563 ntBASIC16.14■□□□□ 0.17
SYNGAP1Q96PV0 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC16.14■□□□□ 0.17
SYNGAP1Q96PV0 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SYNGAP1Q96PV0 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.14■□□□□ 0.17
SYNGAP1Q96PV0 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SYNGAP1Q96PV0 GSN-209ENST00000449733 2702 ntTSL 2 BASIC16.14■□□□□ 0.17
SYNGAP1Q96PV0 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SYNGAP1Q96PV0 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SYNGAP1Q96PV0 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SYNGAP1Q96PV0 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SYNGAP1Q96PV0 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SYNGAP1Q96PV0 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SYNGAP1Q96PV0 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.14■□□□□ 0.17
SYNGAP1Q96PV0 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYNGAP1Q96PV0 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.13■□□□□ 0.17
SYNGAP1Q96PV0 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
SYNGAP1Q96PV0 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SYNGAP1Q96PV0 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYNGAP1Q96PV0 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC16.13■□□□□ 0.17
SYNGAP1Q96PV0 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SYNGAP1Q96PV0 AC067931.2-201ENST00000623655 2003 ntBASIC16.13■□□□□ 0.17
SYNGAP1Q96PV0 AC011498.7-201ENST00000624986 2027 ntBASIC16.13■□□□□ 0.17
SYNGAP1Q96PV0 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SYNGAP1Q96PV0 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.13■□□□□ 0.17
SYNGAP1Q96PV0 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SYNGAP1Q96PV0 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYNGAP1Q96PV0 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC16.13■□□□□ 0.17
SYNGAP1Q96PV0 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYNGAP1Q96PV0 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SYNGAP1Q96PV0 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SYNGAP1Q96PV0 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SYNGAP1Q96PV0 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SYNGAP1Q96PV0 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYNGAP1Q96PV0 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms