Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 XRCC3-202ENST00000553264 3018 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 DDO-201ENST00000368923 1953 ntTSL 2 BASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 SLC45A2-202ENST00000382102 2723 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 MYO1C-202ENST00000361007 4734 ntAPPRIS P3 TSL 5 BASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 AP002008.2-201ENST00000635926 4870 ntBASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 POM121L4P-202ENST00000427789 1891 ntBASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 ARSEP1-201ENST00000420443 635 ntBASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 HNRNPDP1-201ENST00000439535 754 ntBASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 AC009947.1-201ENST00000444350 727 ntBASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 AC092910.1-201ENST00000482027 1129 ntBASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 EDARADD-204ENST00000637660 2803 ntTSL 5 BASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 PSME3-217ENST00000622892 3183 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 EVA1A-201ENST00000233712 1815 ntAPPRIS P2 TSL 2 BASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 AOC2-202ENST00000452774 2572 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 LINC00563-201ENST00000566370 1400 ntBASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 RSPO2-201ENST00000276659 3111 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 ZKSCAN3-203ENST00000377255 4799 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 ERCC5-201ENST00000355739 5082 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 NR4A1-201ENST00000243050 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 GRK7-201ENST00000264952 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 NR3C1-204ENST00000394466 3245 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 NRF1-202ENST00000311967 2481 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CHCHD1Q96BP2 RHOH-217ENST00000610353 2268 ntAPPRIS P1 TSL 4 BASIC10.38□□□□□ -0.75
CHCHD1Q96BP2 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CHCHD1Q96BP2 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CHCHD1Q96BP2 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CHCHD1Q96BP2 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC10.38□□□□□ -0.75
CHCHD1Q96BP2 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CHCHD1Q96BP2 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CHCHD1Q96BP2 PALLD-209ENST00000507735 4379 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CHCHD1Q96BP2 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC10.38□□□□□ -0.75
CHCHD1Q96BP2 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CHCHD1Q96BP2 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
CHCHD1Q96BP2 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
CHCHD1Q96BP2 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CHCHD1Q96BP2 FAM95B1-212ENST00000592873 4692 ntBASIC10.38□□□□□ -0.75
CHCHD1Q96BP2 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC10.38□□□□□ -0.75
CHCHD1Q96BP2 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
CHCHD1Q96BP2 MYRF-201ENST00000265460 5745 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
CHCHD1Q96BP2 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CHCHD1Q96BP2 MISP-201ENST00000215582 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CHCHD1Q96BP2 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CHCHD1Q96BP2 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC10.38□□□□□ -0.75
CHCHD1Q96BP2 TNRC6C-205ENST00000588061 8419 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
CHCHD1Q96BP2 SLC12A6-205ENST00000458406 4425 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CHCHD1Q96BP2 C1R-209ENST00000542285 2660 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CHCHD1Q96BP2 AC020917.4-201ENST00000623994 1999 ntBASIC10.38□□□□□ -0.75
CHCHD1Q96BP2 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC10.38□□□□□ -0.75
CHCHD1Q96BP2 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
CHCHD1Q96BP2 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC10.38□□□□□ -0.75
CHCHD1Q96BP2 ITGA2B-201ENST00000262407 3333 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CHCHD1Q96BP2 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CHCHD1Q96BP2 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
CHCHD1Q96BP2 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CHCHD1Q96BP2 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CHCHD1Q96BP2 AC018712.1-201ENST00000455767 687 ntBASIC10.38□□□□□ -0.75
CHCHD1Q96BP2 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CHCHD1Q96BP2 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC10.38□□□□□ -0.75
CHCHD1Q96BP2 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
CHCHD1Q96BP2 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CHCHD1Q96BP2 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC10.38□□□□□ -0.75
CHCHD1Q96BP2 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC10.38□□□□□ -0.75
CHCHD1Q96BP2 AC027237.1-201ENST00000560942 655 ntBASIC10.38□□□□□ -0.75
CHCHD1Q96BP2 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC10.38□□□□□ -0.75
CHCHD1Q96BP2 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC10.38□□□□□ -0.75
CHCHD1Q96BP2 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms