Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.52□□□□□ -0.08
HLA-CQ95604 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-CQ95604 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-CQ95604 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-CQ95604 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-CQ95604 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.52□□□□□ -0.08
HLA-CQ95604 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC14.52□□□□□ -0.08
HLA-CQ95604 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-CQ95604 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-CQ95604 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-CQ95604 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.52□□□□□ -0.08
HLA-CQ95604 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-CQ95604 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-CQ95604 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
HLA-CQ95604 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-CQ95604 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-CQ95604 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-CQ95604 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-CQ95604 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-CQ95604 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-CQ95604 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-CQ95604 IGHV3-11-201ENST00000390601 473 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
HLA-CQ95604 RPS6P14-201ENST00000425165 719 ntBASIC14.52□□□□□ -0.09
HLA-CQ95604 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC14.52□□□□□ -0.09
HLA-CQ95604 RBPMSLP-201ENST00000433427 502 ntBASIC14.52□□□□□ -0.09
HLA-CQ95604 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC14.52□□□□□ -0.09
HLA-CQ95604 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC14.52□□□□□ -0.09
HLA-CQ95604 IQSEC2-205ENST00000498281 673 ntTSL 3 BASIC14.52□□□□□ -0.09
HLA-CQ95604 PTPN20-229ENST00000513756 640 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-CQ95604 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC14.52□□□□□ -0.09
HLA-CQ95604 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC14.52□□□□□ -0.09
HLA-CQ95604 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
HLA-CQ95604 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
HLA-CQ95604 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC14.52□□□□□ -0.09
HLA-CQ95604 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC14.52□□□□□ -0.09
HLA-CQ95604 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-CQ95604 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-CQ95604 IFNL3P1-201ENST00000595082 501 ntBASIC14.52□□□□□ -0.09
HLA-CQ95604 AC104506.1-201ENST00000609247 429 ntBASIC14.52□□□□□ -0.09
HLA-CQ95604 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-CQ95604 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC14.52□□□□□ -0.09
HLA-CQ95604 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.52□□□□□ -0.09
HLA-CQ95604 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-CQ95604 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.52□□□□□ -0.09
HLA-CQ95604 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-CQ95604 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-CQ95604 AC084018.2-201ENST00000613093 2607 ntBASIC14.52□□□□□ -0.09
HLA-CQ95604 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-CQ95604 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
HLA-CQ95604 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-CQ95604 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-CQ95604 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-CQ95604 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-CQ95604 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-CQ95604 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-CQ95604 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-CQ95604 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-CQ95604 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-CQ95604 MMP19-202ENST00000409200 1431 ntTSL 2 BASIC14.51□□□□□ -0.09
HLA-CQ95604 SERHL2-201ENST00000327678 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-CQ95604 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-CQ95604 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-CQ95604 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-CQ95604 OXGR1-204ENST00000543457 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-CQ95604 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-CQ95604 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
HLA-CQ95604 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
HLA-CQ95604 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.51□□□□□ -0.09
HLA-CQ95604 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-CQ95604 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-CQ95604 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
HLA-CQ95604 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
HLA-CQ95604 APOBEC3B-204ENST00000407298 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-CQ95604 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC14.51□□□□□ -0.09
HLA-CQ95604 DNM1P46-202ENST00000415963 882 ntBASIC14.51□□□□□ -0.09
HLA-CQ95604 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC14.51□□□□□ -0.09
HLA-CQ95604 OLA1-206ENST00000428402 1270 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-CQ95604 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC14.51□□□□□ -0.09
HLA-CQ95604 HLA-W-207ENST00000439514 771 ntBASIC14.51□□□□□ -0.09
HLA-CQ95604 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC14.51□□□□□ -0.09
HLA-CQ95604 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC14.51□□□□□ -0.09
HLA-CQ95604 EIF2S2P5-201ENST00000457635 968 ntBASIC14.51□□□□□ -0.09
HLA-CQ95604 AC099542.2-201ENST00000474149 553 ntTSL 2 BASIC14.51□□□□□ -0.09
HLA-CQ95604 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-CQ95604 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC14.51□□□□□ -0.09
HLA-CQ95604 DLX6-203ENST00000555308 666 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
HLA-CQ95604 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC14.51□□□□□ -0.09
HLA-CQ95604 PCTP-206ENST00000573500 919 ntTSL 3 BASIC14.51□□□□□ -0.09
HLA-CQ95604 TMF1P1-201ENST00000576058 373 ntBASIC14.51□□□□□ -0.09
HLA-CQ95604 DSCAS-201ENST00000581836 553 ntTSL 4 BASIC14.51□□□□□ -0.09
HLA-CQ95604 MIR5193-201ENST00000584510 109 ntBASIC14.51□□□□□ -0.09
HLA-CQ95604 AC091132.6-201ENST00000586411 826 ntTSL 5 BASIC14.51□□□□□ -0.09
HLA-CQ95604 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC14.51□□□□□ -0.09
HLA-CQ95604 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-CQ95604 AC123912.6-201ENST00000612657 315 ntBASIC14.51□□□□□ -0.09
HLA-CQ95604 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-CQ95604 PAX8-AS1-219ENST00000623306 840 ntTSL 5 BASIC14.51□□□□□ -0.09
HLA-CQ95604 COG6-212ENST00000630730 186 ntTSL 5 BASIC14.51□□□□□ -0.09
HLA-CQ95604 AL031430.1-201ENST00000642067 1039 ntBASIC14.51□□□□□ -0.09
HLA-CQ95604 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms