Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 MARCKSL1P2-201ENST00000401037 976 ntBASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 FAR1-IT1-201ENST00000525233 368 ntTSL 3 BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 AC112694.1-202ENST00000540985 943 ntBASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 MIR6074-201ENST00000612054 107 ntBASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 IMPDH1P5-201ENST00000439688 1540 ntBASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 AC023590.1-202ENST00000366457 781 ntTSL 3 BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 Metazoa_SRP.8-201ENST00000398067 251 ntBASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 PHBP3-201ENST00000412562 819 ntBASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 KRT18P8-201ENST00000581937 1246 ntBASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 AC005746.2-201ENST00000585765 470 ntTSL 5 BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 TUBA3GP-201ENST00000410028 1325 ntBASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 AC026271.1-201ENST00000447794 1348 ntBASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 CDK7-201ENST00000256443 1439 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 FES-203ENST00000394302 2133 ntTSL 5 BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 POLR2F-202ENST00000405557 560 ntTSL 5 BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 SNORD23-201ENST00000408876 110 ntBASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 AC069277.1-201ENST00000433639 1083 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 DIS3L2P1-201ENST00000509197 559 ntBASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 AC025265.3-201ENST00000550175 468 ntTSL 3 BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 AC010547.1-202ENST00000567341 230 ntTSL 2 BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 AC024075.2-201ENST00000598112 1473 ntBASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 AL356740.1-201ENST00000602192 1297 ntBASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 AL033381.2-201ENST00000603854 732 ntBASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 AC136475.9-201ENST00000605240 497 ntBASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 POLR2F-213ENST00000606538 760 ntTSL 2 BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 U62317.4-201ENST00000609758 448 ntBASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 LINC00869-208ENST00000621156 737 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 AC022532.1-201ENST00000624563 1728 ntBASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 TRIML2-207ENST00000512729 1639 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 SIGLEC17P-204ENST00000618545 1517 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 HFE-205ENST00000352392 653 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 HMGA1P1-201ENST00000415560 1062 ntBASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 CHCHD2P6-201ENST00000454346 447 ntBASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 TATDN3-208ENST00000526997 794 ntTSL 3 BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 TATDN3-213ENST00000531963 1291 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 RN7SL162P-201ENST00000579233 292 ntBASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 AC091736.1-201ENST00000609370 305 ntBASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
ALMS1Q8TCU4 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 SERPIND1-202ENST00000406799 1798 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 USP8-219ENST00000625664 1568 ntTSL 5 BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 AP000437.1-201ENST00000624057 2085 ntBASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 AC034205.3-201ENST00000603595 1376 ntBASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 OAZ3-201ENST00000321531 851 ntTSL 5 BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 HNRNPA1P9-201ENST00000450624 950 ntBASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 CFL1P1-204ENST00000456375 424 ntTSL 3 BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 AC012100.1-201ENST00000470304 282 ntBASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 JPT1-205ENST00000470924 663 ntTSL 5 BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 FPGT-205ENST00000482102 561 ntTSL 4 BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 RAB6B-205ENST00000486858 880 ntTSL 2 BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 HNRNPA1P72-201ENST00000529511 967 ntBASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 CCDC42-202ENST00000539522 1087 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 MIR3940-201ENST00000579148 102 ntBASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 AC136475.7-201ENST00000602949 592 ntBASIC9.18□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 295.5 ms