Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SYNE1Q8NF91 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
SYNE1Q8NF91 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC4.47□□□□□ -1.69
SYNE1Q8NF91 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC4.47□□□□□ -1.69
SYNE1Q8NF91 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC4.47□□□□□ -1.69
SYNE1Q8NF91 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC4.47□□□□□ -1.69
SYNE1Q8NF91 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
SYNE1Q8NF91 RTN3P1-201ENST00000536295 711 ntBASIC4.47□□□□□ -1.69
SYNE1Q8NF91 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC4.47□□□□□ -1.69
SYNE1Q8NF91 DUX4L46-201ENST00000566845 751 ntBASIC4.47□□□□□ -1.69
SYNE1Q8NF91 OR10B1P-201ENST00000601666 907 ntBASIC4.47□□□□□ -1.69
SYNE1Q8NF91 AC005632.3-201ENST00000605544 308 ntBASIC4.47□□□□□ -1.69
SYNE1Q8NF91 AC133540.1-201ENST00000620845 1019 ntBASIC4.47□□□□□ -1.69
SYNE1Q8NF91 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
SYNE1Q8NF91 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SYNE1Q8NF91 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
SYNE1Q8NF91 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
SYNE1Q8NF91 WASHC2A-201ENST00000282633 4272 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
SYNE1Q8NF91 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
SYNE1Q8NF91 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
SYNE1Q8NF91 SCAMP5-203ENST00000562212 3400 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SYNE1Q8NF91 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC4.47□□□□□ -1.69
SYNE1Q8NF91 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SYNE1Q8NF91 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC4.47□□□□□ -1.69
SYNE1Q8NF91 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SYNE1Q8NF91 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SYNE1Q8NF91 SOX9-201ENST00000245479 3935 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SYNE1Q8NF91 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SYNE1Q8NF91 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC4.47□□□□□ -1.69
SYNE1Q8NF91 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SYNE1Q8NF91 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SYNE1Q8NF91 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC4.47□□□□□ -1.69
SYNE1Q8NF91 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
SYNE1Q8NF91 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC4.47□□□□□ -1.69
SYNE1Q8NF91 RPS9P1-201ENST00000419943 583 ntBASIC4.47□□□□□ -1.69
SYNE1Q8NF91 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC4.47□□□□□ -1.69
SYNE1Q8NF91 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC4.47□□□□□ -1.69
SYNE1Q8NF91 ABR-205ENST00000544583 5595 ntTSL 2 BASIC4.47□□□□□ -1.69
SYNE1Q8NF91 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SYNE1Q8NF91 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SYNE1Q8NF91 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC4.47□□□□□ -1.69
SYNE1Q8NF91 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SYNE1Q8NF91 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC4.47□□□□□ -1.69
SYNE1Q8NF91 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC4.47□□□□□ -1.69
SYNE1Q8NF91 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC4.47□□□□□ -1.69
SYNE1Q8NF91 ERCC6L2-201ENST00000288985 4564 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SYNE1Q8NF91 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC4.47□□□□□ -1.69
SYNE1Q8NF91 AC078875.1-201ENST00000431907 724 ntBASIC4.47□□□□□ -1.69
SYNE1Q8NF91 AC012362.1-201ENST00000434906 739 ntBASIC4.47□□□□□ -1.69
SYNE1Q8NF91 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC4.47□□□□□ -1.69
SYNE1Q8NF91 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC4.47□□□□□ -1.69
SYNE1Q8NF91 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC4.47□□□□□ -1.69
SYNE1Q8NF91 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SYNE1Q8NF91 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
SYNE1Q8NF91 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
SYNE1Q8NF91 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
SYNE1Q8NF91 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
SYNE1Q8NF91 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC4.46□□□□□ -1.69
SYNE1Q8NF91 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
SYNE1Q8NF91 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.69
SYNE1Q8NF91 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
SYNE1Q8NF91 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
SYNE1Q8NF91 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
SYNE1Q8NF91 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
SYNE1Q8NF91 MCCC2-201ENST00000340941 3665 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
SYNE1Q8NF91 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
SYNE1Q8NF91 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
SYNE1Q8NF91 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
SYNE1Q8NF91 SLC6A7-201ENST00000230671 3739 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
SYNE1Q8NF91 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC4.46□□□□□ -1.69
SYNE1Q8NF91 EPB41L2-205ENST00000445890 3677 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
SYNE1Q8NF91 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC4.46□□□□□ -1.69
SYNE1Q8NF91 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC4.46□□□□□ -1.69
SYNE1Q8NF91 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC4.46□□□□□ -1.69
SYNE1Q8NF91 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
SYNE1Q8NF91 HNRNPA1P41-201ENST00000397777 928 ntBASIC4.46□□□□□ -1.69
SYNE1Q8NF91 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC4.46□□□□□ -1.69
SYNE1Q8NF91 AC006122.1-201ENST00000493323 440 ntBASIC4.46□□□□□ -1.69
SYNE1Q8NF91 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
SYNE1Q8NF91 AP002803.1-201ENST00000528836 498 ntBASIC4.46□□□□□ -1.69
SYNE1Q8NF91 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC4.46□□□□□ -1.69
SYNE1Q8NF91 AC018635.2-201ENST00000608625 364 ntBASIC4.46□□□□□ -1.69
SYNE1Q8NF91 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC4.46□□□□□ -1.69
SYNE1Q8NF91 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
SYNE1Q8NF91 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.69
SYNE1Q8NF91 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
SYNE1Q8NF91 WDR82-201ENST00000296490 4293 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
SYNE1Q8NF91 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
SYNE1Q8NF91 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
SYNE1Q8NF91 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SYNE1Q8NF91 ELN-204ENST00000357036 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SYNE1Q8NF91 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
SYNE1Q8NF91 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SYNE1Q8NF91 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
SYNE1Q8NF91 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
SYNE1Q8NF91 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC4.46□□□□□ -1.7
SYNE1Q8NF91 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC4.46□□□□□ -1.7
SYNE1Q8NF91 AL805961.1-201ENST00000642026 753 ntBASIC4.46□□□□□ -1.7
SYNE1Q8NF91 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
SYNE1Q8NF91 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms