Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AP000322.3-201ENST00000608665 388 ntBASIC15.2■□□□□ 0.02
RNF135Q8IUD6 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 SALL4P5-201ENST00000419001 1760 ntBASIC15.2■□□□□ 0.02
RNF135Q8IUD6 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 MTHFR-210ENST00000641407 2387 ntBASIC15.2■□□□□ 0.02
RNF135Q8IUD6 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 SRC-202ENST00000373558 4304 ntTSL 5 BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 HLA-DQB1-202ENST00000399079 1501 ntBASIC15.19■□□□□ 0.02
RNF135Q8IUD6 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 RNA5SP359-201ENST00000364838 113 ntBASIC15.19■□□□□ 0.02
RNF135Q8IUD6 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 CICP12-201ENST00000455801 843 ntBASIC15.19■□□□□ 0.02
RNF135Q8IUD6 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 PEBP1P2-201ENST00000603980 558 ntBASIC15.19■□□□□ 0.02
RNF135Q8IUD6 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 AC003102.2-201ENST00000589195 1469 ntBASIC15.19■□□□□ 0.02
RNF135Q8IUD6 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms