Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CCDC25Q86WR0 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
CCDC25Q86WR0 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC25Q86WR0 TP73-207ENST00000378290 1831 ntTSL 2 BASIC14.83□□□□□ -0.04
CCDC25Q86WR0 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC14.83□□□□□ -0.04
CCDC25Q86WR0 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CCDC25Q86WR0 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.83□□□□□ -0.04
CCDC25Q86WR0 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CCDC25Q86WR0 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
CCDC25Q86WR0 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC14.83□□□□□ -0.04
CCDC25Q86WR0 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC25Q86WR0 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CCDC25Q86WR0 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC25Q86WR0 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC25Q86WR0 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC25Q86WR0 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.83□□□□□ -0.04
CCDC25Q86WR0 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.83□□□□□ -0.04
CCDC25Q86WR0 DFFBP1-201ENST00000433250 979 ntBASIC14.83□□□□□ -0.04
CCDC25Q86WR0 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.83□□□□□ -0.04
CCDC25Q86WR0 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.83□□□□□ -0.04
CCDC25Q86WR0 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CCDC25Q86WR0 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.83□□□□□ -0.04
CCDC25Q86WR0 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.83□□□□□ -0.04
CCDC25Q86WR0 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.83□□□□□ -0.04
CCDC25Q86WR0 AC145423.3-201ENST00000615987 467 ntBASIC14.83□□□□□ -0.04
CCDC25Q86WR0 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC14.83□□□□□ -0.04
CCDC25Q86WR0 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC25Q86WR0 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CCDC25Q86WR0 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC25Q86WR0 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC25Q86WR0 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
CCDC25Q86WR0 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.83□□□□□ -0.04
CCDC25Q86WR0 AC073957.3-201ENST00000609998 6758 ntBASIC14.83□□□□□ -0.04
CCDC25Q86WR0 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC25Q86WR0 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC25Q86WR0 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.83□□□□□ -0.04
CCDC25Q86WR0 MSTO2P-201ENST00000314835 1709 ntBASIC14.83□□□□□ -0.04
CCDC25Q86WR0 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC14.83□□□□□ -0.04
CCDC25Q86WR0 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC14.83□□□□□ -0.04
CCDC25Q86WR0 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
CCDC25Q86WR0 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC25Q86WR0 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC25Q86WR0 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC14.83□□□□□ -0.04
CCDC25Q86WR0 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC25Q86WR0 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC14.82□□□□□ -0.04
CCDC25Q86WR0 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC25Q86WR0 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC25Q86WR0 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC14.82□□□□□ -0.04
CCDC25Q86WR0 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC25Q86WR0 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CCDC25Q86WR0 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC25Q86WR0 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CCDC25Q86WR0 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC25Q86WR0 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC25Q86WR0 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC25Q86WR0 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CCDC25Q86WR0 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CCDC25Q86WR0 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC25Q86WR0 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC25Q86WR0 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC25Q86WR0 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC14.82□□□□□ -0.04
CCDC25Q86WR0 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC25Q86WR0 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC25Q86WR0 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC25Q86WR0 STX3-207ENST00000633708 3111 ntTSL 5 BASIC14.82□□□□□ -0.04
CCDC25Q86WR0 AC125807.2-201ENST00000513358 3514 ntBASIC14.82□□□□□ -0.04
CCDC25Q86WR0 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC25Q86WR0 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC25Q86WR0 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC25Q86WR0 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC25Q86WR0 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC25Q86WR0 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC25Q86WR0 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC25Q86WR0 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC25Q86WR0 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC25Q86WR0 RN7SKP175-201ENST00000408472 289 ntBASIC14.82□□□□□ -0.04
CCDC25Q86WR0 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC25Q86WR0 AL162726.2-201ENST00000438986 1017 ntBASIC14.82□□□□□ -0.04
CCDC25Q86WR0 ALG3P1-201ENST00000508806 1114 ntBASIC14.82□□□□□ -0.04
CCDC25Q86WR0 AC068587.3-201ENST00000526613 355 ntBASIC14.82□□□□□ -0.04
CCDC25Q86WR0 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.82□□□□□ -0.04
CCDC25Q86WR0 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC25Q86WR0 AL132655.2-201ENST00000596276 594 ntBASIC14.82□□□□□ -0.04
CCDC25Q86WR0 CHCHD2P3-201ENST00000603038 451 ntBASIC14.82□□□□□ -0.04
CCDC25Q86WR0 AC104506.1-201ENST00000609247 429 ntBASIC14.82□□□□□ -0.04
CCDC25Q86WR0 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
CCDC25Q86WR0 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC25Q86WR0 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC25Q86WR0 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC25Q86WR0 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC25Q86WR0 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC25Q86WR0 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC25Q86WR0 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC25Q86WR0 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC25Q86WR0 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC25Q86WR0 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC25Q86WR0 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC25Q86WR0 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
CCDC25Q86WR0 AC007541.1-201ENST00000570282 1469 ntBASIC14.82□□□□□ -0.04
CCDC25Q86WR0 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms