Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RNF44Q7L0R7 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC13.72□□□□□ -0.21
RNF44Q7L0R7 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF44Q7L0R7 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC13.72□□□□□ -0.21
RNF44Q7L0R7 AL353637.1-201ENST00000451571 732 ntBASIC13.72□□□□□ -0.21
RNF44Q7L0R7 RN7SL530P-201ENST00000485097 298 ntBASIC13.72□□□□□ -0.21
RNF44Q7L0R7 NUP210P1-202ENST00000504322 710 ntBASIC13.72□□□□□ -0.21
RNF44Q7L0R7 POU5F1P2-201ENST00000521750 823 ntBASIC13.72□□□□□ -0.21
RNF44Q7L0R7 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RNF44Q7L0R7 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC13.72□□□□□ -0.21
RNF44Q7L0R7 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC13.72□□□□□ -0.21
RNF44Q7L0R7 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC13.72□□□□□ -0.21
RNF44Q7L0R7 IRF3-215ENST00000596822 823 ntTSL 3 BASIC13.72□□□□□ -0.21
RNF44Q7L0R7 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC13.72□□□□□ -0.21
RNF44Q7L0R7 CU633904.3-201ENST00000624042 1029 ntBASIC13.72□□□□□ -0.21
RNF44Q7L0R7 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC13.72□□□□□ -0.21
RNF44Q7L0R7 AC152010.1-201ENST00000415779 2006 ntBASIC13.72□□□□□ -0.21
RNF44Q7L0R7 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF44Q7L0R7 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.72□□□□□ -0.21
RNF44Q7L0R7 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
RNF44Q7L0R7 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF44Q7L0R7 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC13.72□□□□□ -0.21
RNF44Q7L0R7 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RNF44Q7L0R7 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF44Q7L0R7 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF44Q7L0R7 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF44Q7L0R7 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF44Q7L0R7 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF44Q7L0R7 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF44Q7L0R7 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF44Q7L0R7 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF44Q7L0R7 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF44Q7L0R7 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF44Q7L0R7 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.71□□□□□ -0.21
RNF44Q7L0R7 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF44Q7L0R7 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF44Q7L0R7 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF44Q7L0R7 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RNF44Q7L0R7 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF44Q7L0R7 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
RNF44Q7L0R7 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.71□□□□□ -0.21
RNF44Q7L0R7 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RNF44Q7L0R7 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.71□□□□□ -0.21
RNF44Q7L0R7 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
RNF44Q7L0R7 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC13.71□□□□□ -0.21
RNF44Q7L0R7 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RNF44Q7L0R7 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF44Q7L0R7 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF44Q7L0R7 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF44Q7L0R7 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RNF44Q7L0R7 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF44Q7L0R7 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
RNF44Q7L0R7 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF44Q7L0R7 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
RNF44Q7L0R7 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
RNF44Q7L0R7 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF44Q7L0R7 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC13.71□□□□□ -0.21
RNF44Q7L0R7 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC13.71□□□□□ -0.21
RNF44Q7L0R7 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
RNF44Q7L0R7 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RNF44Q7L0R7 AL133466.1-201ENST00000447582 150 ntBASIC13.71□□□□□ -0.21
RNF44Q7L0R7 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC13.71□□□□□ -0.21
RNF44Q7L0R7 TPI1-206ENST00000488464 791 ntTSL 5 BASIC13.71□□□□□ -0.21
RNF44Q7L0R7 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RNF44Q7L0R7 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC13.71□□□□□ -0.21
RNF44Q7L0R7 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC13.71□□□□□ -0.21
RNF44Q7L0R7 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RNF44Q7L0R7 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RNF44Q7L0R7 MIR4754-201ENST00000582477 89 ntBASIC13.71□□□□□ -0.21
RNF44Q7L0R7 AC020922.3-201ENST00000595064 547 ntBASIC13.71□□□□□ -0.21
RNF44Q7L0R7 HPN-206ENST00000597419 1212 ntTSL 5 BASIC13.71□□□□□ -0.21
RNF44Q7L0R7 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
RNF44Q7L0R7 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RNF44Q7L0R7 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF44Q7L0R7 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC13.71□□□□□ -0.22
RNF44Q7L0R7 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.71□□□□□ -0.22
RNF44Q7L0R7 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RNF44Q7L0R7 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
RNF44Q7L0R7 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
RNF44Q7L0R7 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
RNF44Q7L0R7 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.71□□□□□ -0.22
RNF44Q7L0R7 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
RNF44Q7L0R7 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.71□□□□□ -0.22
RNF44Q7L0R7 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RNF44Q7L0R7 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.71□□□□□ -0.22
RNF44Q7L0R7 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.71□□□□□ -0.22
RNF44Q7L0R7 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.71□□□□□ -0.22
RNF44Q7L0R7 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
RNF44Q7L0R7 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
RNF44Q7L0R7 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
RNF44Q7L0R7 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC13.71□□□□□ -0.22
RNF44Q7L0R7 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RNF44Q7L0R7 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms