Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SNRPFP62306 AC067931.2-201ENST00000623655 2003 ntBASIC15.43■□□□□ 0.06
SNRPFP62306 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC15.43■□□□□ 0.06
SNRPFP62306 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC15.43■□□□□ 0.06
SNRPFP62306 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SNRPFP62306 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
SNRPFP62306 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SNRPFP62306 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SNRPFP62306 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SNRPFP62306 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
SNRPFP62306 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC15.43■□□□□ 0.06
SNRPFP62306 SNORA50C-201ENST00000408535 133 ntBASIC15.43■□□□□ 0.06
SNRPFP62306 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC15.43■□□□□ 0.06
SNRPFP62306 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC15.43■□□□□ 0.06
SNRPFP62306 NAGK-204ENST00000443872 878 ntTSL 3 BASIC15.43■□□□□ 0.06
SNRPFP62306 Z97180.1-201ENST00000445173 988 ntBASIC15.43■□□□□ 0.06
SNRPFP62306 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC15.43■□□□□ 0.06
SNRPFP62306 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC15.43■□□□□ 0.06
SNRPFP62306 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC15.43■□□□□ 0.06
SNRPFP62306 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC15.43■□□□□ 0.06
SNRPFP62306 SLC25A15P3-201ENST00000505530 290 ntBASIC15.43■□□□□ 0.06
SNRPFP62306 ALG1L13P-202ENST00000519320 584 ntBASIC15.43■□□□□ 0.06
SNRPFP62306 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC15.43■□□□□ 0.06
SNRPFP62306 STUB1-204ENST00000564370 875 ntTSL 2 BASIC15.43■□□□□ 0.06
SNRPFP62306 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC15.43■□□□□ 0.06
SNRPFP62306 IRF3-215ENST00000596822 823 ntTSL 3 BASIC15.43■□□□□ 0.06
SNRPFP62306 AL133467.4-201ENST00000602953 725 ntBASIC15.43■□□□□ 0.06
SNRPFP62306 SNORA50.1-201ENST00000628590 135 ntBASIC15.43■□□□□ 0.06
SNRPFP62306 AC008132.1-202ENST00000342005 1389 ntBASIC15.43■□□□□ 0.06
SNRPFP62306 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SNRPFP62306 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
SNRPFP62306 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SNRPFP62306 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SNRPFP62306 AC008620.2-201ENST00000510294 1569 ntBASIC15.43■□□□□ 0.06
SNRPFP62306 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SNRPFP62306 SALL4P6-201ENST00000429385 1691 ntBASIC15.43■□□□□ 0.06
SNRPFP62306 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
SNRPFP62306 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SNRPFP62306 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.43■□□□□ 0.06
SNRPFP62306 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SNRPFP62306 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SNRPFP62306 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC15.43■□□□□ 0.06
SNRPFP62306 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SNRPFP62306 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SNRPFP62306 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
SNRPFP62306 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SNRPFP62306 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC15.43■□□□□ 0.06
SNRPFP62306 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.43■□□□□ 0.06
SNRPFP62306 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
SNRPFP62306 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SNRPFP62306 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SNRPFP62306 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SNRPFP62306 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SNRPFP62306 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SNRPFP62306 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SNRPFP62306 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
SNRPFP62306 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SNRPFP62306 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SNRPFP62306 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SNRPFP62306 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
SNRPFP62306 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SNRPFP62306 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.42■□□□□ 0.06
SNRPFP62306 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC15.42■□□□□ 0.06
SNRPFP62306 AC025183.3-201ENST00000623526 1482 ntBASIC15.42■□□□□ 0.06
SNRPFP62306 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
SNRPFP62306 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
SNRPFP62306 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SNRPFP62306 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SNRPFP62306 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SNRPFP62306 AL391647.1-201ENST00000395664 511 ntBASIC15.42■□□□□ 0.06
SNRPFP62306 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SNRPFP62306 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SNRPFP62306 AC026320.2-201ENST00000434379 478 ntBASIC15.42■□□□□ 0.06
SNRPFP62306 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC15.42■□□□□ 0.06
SNRPFP62306 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC15.42■□□□□ 0.06
SNRPFP62306 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC15.42■□□□□ 0.06
SNRPFP62306 AC005077.2-201ENST00000449786 690 ntBASIC15.42■□□□□ 0.06
SNRPFP62306 RN7SL11P-201ENST00000471305 293 ntBASIC15.42■□□□□ 0.06
SNRPFP62306 AC008723.1-201ENST00000506922 207 ntBASIC15.42■□□□□ 0.06
SNRPFP62306 ADM-202ENST00000524948 584 ntTSL 2 BASIC15.42■□□□□ 0.06
SNRPFP62306 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.42■□□□□ 0.06
SNRPFP62306 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC15.42■□□□□ 0.06
SNRPFP62306 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SNRPFP62306 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC15.42■□□□□ 0.06
SNRPFP62306 NAT9-211ENST00000580632 799 ntTSL 3 BASIC15.42■□□□□ 0.06
SNRPFP62306 MIR4754-201ENST00000582477 89 ntBASIC15.42■□□□□ 0.06
SNRPFP62306 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC15.42■□□□□ 0.06
SNRPFP62306 AC015967.2-201ENST00000624092 234 ntBASIC15.42■□□□□ 0.06
SNRPFP62306 AC006435.4-201ENST00000625037 234 ntBASIC15.42■□□□□ 0.06
SNRPFP62306 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC15.42■□□□□ 0.06
SNRPFP62306 AL356737.1-201ENST00000634391 234 ntBASIC15.42■□□□□ 0.06
SNRPFP62306 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.42■□□□□ 0.06
SNRPFP62306 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SNRPFP62306 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.42■□□□□ 0.06
SNRPFP62306 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SNRPFP62306 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
SNRPFP62306 AL133338.1-201ENST00000565695 1517 ntBASIC15.42■□□□□ 0.06
SNRPFP62306 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SNRPFP62306 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
SNRPFP62306 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms