Protein–RNA interactions for Protein: P53677

AP3M2, AP-3 complex subunit mu-2, humanhuman

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3M2P53677 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP3M2P53677 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP3M2P53677 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP3M2P53677 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP3M2P53677 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP3M2P53677 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP3M2P53677 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP3M2P53677 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
AP3M2P53677 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP3M2P53677 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP3M2P53677 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP3M2P53677 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP3M2P53677 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP3M2P53677 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP3M2P53677 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP3M2P53677 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP3M2P53677 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP3M2P53677 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP3M2P53677 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP3M2P53677 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
AP3M2P53677 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP3M2P53677 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
AP3M2P53677 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP3M2P53677 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP3M2P53677 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
AP3M2P53677 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
AP3M2P53677 PDIA3P2-201ENST00000428073 158 ntBASIC15.3■□□□□ 0.04
AP3M2P53677 AC026320.2-201ENST00000434379 478 ntBASIC15.3■□□□□ 0.04
AP3M2P53677 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
AP3M2P53677 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC15.3■□□□□ 0.04
AP3M2P53677 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.3■□□□□ 0.04
AP3M2P53677 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.3■□□□□ 0.04
AP3M2P53677 AL122018.1-201ENST00000446607 2310 ntBASIC15.3■□□□□ 0.04
AP3M2P53677 TUBB4AP1-201ENST00000450755 1325 ntBASIC15.3■□□□□ 0.04
AP3M2P53677 KRT8P31-201ENST00000504812 1408 ntBASIC15.3■□□□□ 0.04
AP3M2P53677 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP3M2P53677 AC005740.1-201ENST00000515639 522 ntBASIC15.3■□□□□ 0.04
AP3M2P53677 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC15.3■□□□□ 0.04
AP3M2P53677 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.3■□□□□ 0.04
AP3M2P53677 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC15.3■□□□□ 0.04
AP3M2P53677 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP3M2P53677 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC15.3■□□□□ 0.04
AP3M2P53677 MIR4754-201ENST00000582477 89 ntBASIC15.3■□□□□ 0.04
AP3M2P53677 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC15.3■□□□□ 0.04
AP3M2P53677 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC15.3■□□□□ 0.04
AP3M2P53677 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP3M2P53677 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC15.3■□□□□ 0.04
AP3M2P53677 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC15.3■□□□□ 0.04
AP3M2P53677 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC15.3■□□□□ 0.04
AP3M2P53677 AC138627.1-207ENST00000641560 1006 ntBASIC15.3■□□□□ 0.04
AP3M2P53677 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP3M2P53677 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP3M2P53677 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.3■□□□□ 0.04
AP3M2P53677 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
AP3M2P53677 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
AP3M2P53677 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
AP3M2P53677 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP3M2P53677 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP3M2P53677 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP3M2P53677 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
AP3M2P53677 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
AP3M2P53677 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
AP3M2P53677 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC15.29■□□□□ 0.04
AP3M2P53677 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC15.29■□□□□ 0.04
AP3M2P53677 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC15.29■□□□□ 0.04
AP3M2P53677 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.29■□□□□ 0.04
AP3M2P53677 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP3M2P53677 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
AP3M2P53677 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP3M2P53677 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC15.29■□□□□ 0.04
AP3M2P53677 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC15.29■□□□□ 0.04
AP3M2P53677 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC15.29■□□□□ 0.04
AP3M2P53677 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
AP3M2P53677 NAGK-204ENST00000443872 878 ntTSL 3 BASIC15.29■□□□□ 0.04
AP3M2P53677 AL133466.1-201ENST00000447582 150 ntBASIC15.29■□□□□ 0.04
AP3M2P53677 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC15.29■□□□□ 0.04
AP3M2P53677 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC15.29■□□□□ 0.04
AP3M2P53677 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC15.29■□□□□ 0.04
AP3M2P53677 ALG1L13P-202ENST00000519320 584 ntBASIC15.29■□□□□ 0.04
AP3M2P53677 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC15.29■□□□□ 0.04
AP3M2P53677 NDUFB10P1-201ENST00000567319 521 ntBASIC15.29■□□□□ 0.04
AP3M2P53677 RN7SL455P-201ENST00000580629 282 ntBASIC15.29■□□□□ 0.04
AP3M2P53677 NAT9-220ENST00000582870 896 ntTSL 5 BASIC15.29■□□□□ 0.04
AP3M2P53677 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
AP3M2P53677 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
AP3M2P53677 AC020922.3-201ENST00000595064 547 ntBASIC15.29■□□□□ 0.04
AP3M2P53677 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC15.29■□□□□ 0.04
AP3M2P53677 AL353770.1-201ENST00000614915 403 ntBASIC15.29■□□□□ 0.04
AP3M2P53677 CU633904.3-201ENST00000624042 1029 ntBASIC15.29■□□□□ 0.04
AP3M2P53677 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.29■□□□□ 0.04
AP3M2P53677 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP3M2P53677 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP3M2P53677 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.29■□□□□ 0.04
AP3M2P53677 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
AP3M2P53677 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
AP3M2P53677 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP3M2P53677 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
AP3M2P53677 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP3M2P53677 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP3M2P53677 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms