Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BRCC3P46736 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BRCC3P46736 CELP-201ENST00000411440 1249 ntTSL 5 BASIC15.11■□□□□ 0.01
BRCC3P46736 HMGA1P1-201ENST00000415560 1062 ntBASIC15.11■□□□□ 0.01
BRCC3P46736 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BRCC3P46736 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BRCC3P46736 AC004837.1-201ENST00000446267 564 ntBASIC15.11■□□□□ 0.01
BRCC3P46736 DPY19L2P5-201ENST00000456300 331 ntBASIC15.11■□□□□ 0.01
BRCC3P46736 KRT18P15-201ENST00000458108 1291 ntBASIC15.11■□□□□ 0.01
BRCC3P46736 RN7SL788P-201ENST00000460504 316 ntBASIC15.11■□□□□ 0.01
BRCC3P46736 SLC25A15P3-201ENST00000505530 290 ntBASIC15.11■□□□□ 0.01
BRCC3P46736 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC15.11■□□□□ 0.01
BRCC3P46736 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC15.11■□□□□ 0.01
BRCC3P46736 AP003398.1-201ENST00000531124 318 ntBASIC15.11■□□□□ 0.01
BRCC3P46736 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
BRCC3P46736 AC145285.5-201ENST00000562217 361 ntBASIC15.11■□□□□ 0.01
BRCC3P46736 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC15.11■□□□□ 0.01
BRCC3P46736 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC15.11■□□□□ 0.01
BRCC3P46736 GMFG-209ENST00000600322 622 ntTSL 5 BASIC15.11■□□□□ 0.01
BRCC3P46736 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC15.11■□□□□ 0.01
BRCC3P46736 SARS-202ENST00000369923 1882 ntTSL 5 BASIC15.11■□□□□ 0.01
BRCC3P46736 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
BRCC3P46736 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.11■□□□□ 0.01
BRCC3P46736 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
BRCC3P46736 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
BRCC3P46736 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
BRCC3P46736 SHMT1P1-201ENST00000419974 1312 ntBASIC15.11■□□□□ 0.01
BRCC3P46736 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
BRCC3P46736 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BRCC3P46736 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BRCC3P46736 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BRCC3P46736 AC090502.4-201ENST00000551714 1386 ntBASIC15.11■□□□□ 0.01
BRCC3P46736 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
BRCC3P46736 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
BRCC3P46736 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
BRCC3P46736 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BRCC3P46736 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
BRCC3P46736 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.1■□□□□ 0.01
BRCC3P46736 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
BRCC3P46736 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BRCC3P46736 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BRCC3P46736 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.1■□□□□ 0.01
BRCC3P46736 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
BRCC3P46736 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
BRCC3P46736 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
BRCC3P46736 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BRCC3P46736 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.1■□□□□ 0.01
BRCC3P46736 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
BRCC3P46736 KRT8P43-201ENST00000406052 1458 ntBASIC15.1■□□□□ 0.01
BRCC3P46736 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC15.1■□□□□ 0.01
BRCC3P46736 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
BRCC3P46736 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BRCC3P46736 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC15.1■□□□□ 0.01
BRCC3P46736 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC15.1■□□□□ 0.01
BRCC3P46736 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC15.1■□□□□ 0.01
BRCC3P46736 PPP1R2P4-201ENST00000424051 595 ntBASIC15.1■□□□□ 0.01
BRCC3P46736 AC012362.1-201ENST00000434906 739 ntBASIC15.1■□□□□ 0.01
BRCC3P46736 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC15.1■□□□□ 0.01
BRCC3P46736 RN7SL564P-201ENST00000496309 250 ntBASIC15.1■□□□□ 0.01
BRCC3P46736 IGHV3-37-201ENST00000518544 340 ntBASIC15.1■□□□□ 0.01
BRCC3P46736 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC15.1■□□□□ 0.01
BRCC3P46736 MBP-227ENST00000526111 581 ntTSL 4 BASIC15.1■□□□□ 0.01
BRCC3P46736 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC15.1■□□□□ 0.01
BRCC3P46736 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC15.1■□□□□ 0.01
BRCC3P46736 AC068867.1-201ENST00000559855 150 ntBASIC15.1■□□□□ 0.01
BRCC3P46736 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC15.1■□□□□ 0.01
BRCC3P46736 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
BRCC3P46736 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
BRCC3P46736 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BRCC3P46736 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BRCC3P46736 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
BRCC3P46736 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BRCC3P46736 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BRCC3P46736 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
BRCC3P46736 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BRCC3P46736 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
BRCC3P46736 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
BRCC3P46736 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC15.1■□□□□ 0.01
BRCC3P46736 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
BRCC3P46736 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BRCC3P46736 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BRCC3P46736 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BRCC3P46736 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
BRCC3P46736 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.1■□□□□ 0.01
BRCC3P46736 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.1■□□□□ 0.01
BRCC3P46736 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BRCC3P46736 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BRCC3P46736 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.09■□□□□ 0.01
BRCC3P46736 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC15.09■□□□□ 0.01
BRCC3P46736 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
BRCC3P46736 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
BRCC3P46736 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
BRCC3P46736 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
BRCC3P46736 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
BRCC3P46736 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC15.09■□□□□ 0.01
BRCC3P46736 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
BRCC3P46736 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
BRCC3P46736 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
BRCC3P46736 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC15.09■□□□□ 0.01
BRCC3P46736 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms