Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MTHFRP42898 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
MTHFRP42898 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MTHFRP42898 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MTHFRP42898 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MTHFRP42898 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.9□□□□□ -0.02
MTHFRP42898 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MTHFRP42898 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MTHFRP42898 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MTHFRP42898 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.9□□□□□ -0.02
MTHFRP42898 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
MTHFRP42898 AC007326.2-201ENST00000624224 7579 ntBASIC14.9□□□□□ -0.02
MTHFRP42898 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
MTHFRP42898 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MTHFRP42898 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
MTHFRP42898 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
MTHFRP42898 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC14.9□□□□□ -0.02
MTHFRP42898 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MTHFRP42898 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MTHFRP42898 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
MTHFRP42898 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
MTHFRP42898 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
MTHFRP42898 AC108734.2-201ENST00000420887 1069 ntBASIC14.9□□□□□ -0.02
MTHFRP42898 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
MTHFRP42898 PPP1R2P4-201ENST00000424051 595 ntBASIC14.9□□□□□ -0.02
MTHFRP42898 GRPEL2P1-201ENST00000453145 339 ntBASIC14.9□□□□□ -0.02
MTHFRP42898 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC14.9□□□□□ -0.02
MTHFRP42898 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MTHFRP42898 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
MTHFRP42898 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
MTHFRP42898 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
MTHFRP42898 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC14.9□□□□□ -0.02
MTHFRP42898 KRT8P2-201ENST00000556193 944 ntBASIC14.9□□□□□ -0.02
MTHFRP42898 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC14.9□□□□□ -0.02
MTHFRP42898 AC005586.2-201ENST00000563946 837 ntBASIC14.9□□□□□ -0.02
MTHFRP42898 AP005264.5-201ENST00000590066 467 ntBASIC14.9□□□□□ -0.02
MTHFRP42898 AL021707.6-201ENST00000609212 491 ntBASIC14.9□□□□□ -0.02
MTHFRP42898 AL359091.4-201ENST00000610052 409 ntBASIC14.9□□□□□ -0.02
MTHFRP42898 HELLS-212ENST00000630929 400 ntTSL 5 BASIC14.9□□□□□ -0.02
MTHFRP42898 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
MTHFRP42898 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.9□□□□□ -0.02
MTHFRP42898 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MTHFRP42898 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
MTHFRP42898 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MTHFRP42898 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
MTHFRP42898 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
MTHFRP42898 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MTHFRP42898 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MTHFRP42898 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MTHFRP42898 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.9□□□□□ -0.02
MTHFRP42898 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
MTHFRP42898 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC14.9□□□□□ -0.02
MTHFRP42898 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MTHFRP42898 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MTHFRP42898 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MTHFRP42898 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MTHFRP42898 GRK6P1-201ENST00000400595 1711 ntBASIC14.89□□□□□ -0.03
MTHFRP42898 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
MTHFRP42898 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MTHFRP42898 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MTHFRP42898 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.89□□□□□ -0.03
MTHFRP42898 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
MTHFRP42898 FUCA1P1-201ENST00000374476 1351 ntBASIC14.89□□□□□ -0.03
MTHFRP42898 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
MTHFRP42898 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MTHFRP42898 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MTHFRP42898 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.89□□□□□ -0.03
MTHFRP42898 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
MTHFRP42898 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MTHFRP42898 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.89□□□□□ -0.03
MTHFRP42898 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.89□□□□□ -0.03
MTHFRP42898 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MTHFRP42898 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.89□□□□□ -0.03
MTHFRP42898 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MTHFRP42898 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
MTHFRP42898 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
MTHFRP42898 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
MTHFRP42898 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC14.89□□□□□ -0.03
MTHFRP42898 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC14.89□□□□□ -0.03
MTHFRP42898 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
MTHFRP42898 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
MTHFRP42898 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MTHFRP42898 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
MTHFRP42898 LINC00265-2P-201ENST00000413372 782 ntBASIC14.89□□□□□ -0.03
MTHFRP42898 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC14.89□□□□□ -0.03
MTHFRP42898 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC14.89□□□□□ -0.03
MTHFRP42898 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MTHFRP42898 VENTXP4-201ENST00000449029 958 ntBASIC14.89□□□□□ -0.03
MTHFRP42898 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MTHFRP42898 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MTHFRP42898 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC14.89□□□□□ -0.03
MTHFRP42898 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC14.89□□□□□ -0.03
MTHFRP42898 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC14.89□□□□□ -0.03
MTHFRP42898 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC14.89□□□□□ -0.03
MTHFRP42898 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC14.89□□□□□ -0.03
MTHFRP42898 AC026470.1-201ENST00000478038 846 ntBASIC14.89□□□□□ -0.03
MTHFRP42898 AC090136.2-201ENST00000517809 420 ntBASIC14.89□□□□□ -0.03
MTHFRP42898 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC14.89□□□□□ -0.03
MTHFRP42898 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC14.89□□□□□ -0.03
MTHFRP42898 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms