Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 AL391647.1-201ENST00000395664 511 ntBASIC13.76□□□□□ -0.21
HTR1EP28566 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC13.76□□□□□ -0.21
HTR1EP28566 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.76□□□□□ -0.21
HTR1EP28566 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC13.76□□□□□ -0.21
HTR1EP28566 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HTR1EP28566 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC13.76□□□□□ -0.21
HTR1EP28566 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.76□□□□□ -0.21
HTR1EP28566 AC104506.1-201ENST00000609247 429 ntBASIC13.76□□□□□ -0.21
HTR1EP28566 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC13.76□□□□□ -0.21
HTR1EP28566 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.76□□□□□ -0.21
HTR1EP28566 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.76□□□□□ -0.21
HTR1EP28566 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HTR1EP28566 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HTR1EP28566 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HTR1EP28566 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HTR1EP28566 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HTR1EP28566 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HTR1EP28566 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.76□□□□□ -0.21
HTR1EP28566 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.76□□□□□ -0.21
HTR1EP28566 AC019294.4-201ENST00000561777 2905 ntBASIC13.76□□□□□ -0.21
HTR1EP28566 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC13.76□□□□□ -0.21
HTR1EP28566 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
HTR1EP28566 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
HTR1EP28566 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.76□□□□□ -0.21
HTR1EP28566 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.76□□□□□ -0.21
HTR1EP28566 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
HTR1EP28566 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
HTR1EP28566 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HTR1EP28566 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HTR1EP28566 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.75□□□□□ -0.21
HTR1EP28566 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.75□□□□□ -0.21
HTR1EP28566 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HTR1EP28566 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HTR1EP28566 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HTR1EP28566 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
HTR1EP28566 AC138028.6-201ENST00000616106 1482 ntBASIC13.75□□□□□ -0.21
HTR1EP28566 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.75□□□□□ -0.21
HTR1EP28566 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC13.75□□□□□ -0.21
HTR1EP28566 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HTR1EP28566 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.75□□□□□ -0.21
HTR1EP28566 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HTR1EP28566 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.75□□□□□ -0.21
HTR1EP28566 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HTR1EP28566 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HTR1EP28566 AL365181.3-201ENST00000605886 3222 ntBASIC13.75□□□□□ -0.21
HTR1EP28566 STK25-235ENST00000543554 2556 ntTSL 2 BASIC13.75□□□□□ -0.21
HTR1EP28566 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HTR1EP28566 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
HTR1EP28566 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
HTR1EP28566 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC13.75□□□□□ -0.21
HTR1EP28566 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.75□□□□□ -0.21
HTR1EP28566 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC13.75□□□□□ -0.21
HTR1EP28566 AL161932.2-201ENST00000435436 679 ntBASIC13.75□□□□□ -0.21
HTR1EP28566 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HTR1EP28566 AL591846.1-201ENST00000451736 433 ntBASIC13.75□□□□□ -0.21
HTR1EP28566 SCARNA20.5-201ENST00000516991 142 ntBASIC13.75□□□□□ -0.21
HTR1EP28566 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC13.75□□□□□ -0.21
HTR1EP28566 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HTR1EP28566 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.75□□□□□ -0.21
HTR1EP28566 AC027237.1-201ENST00000560942 655 ntBASIC13.75□□□□□ -0.21
HTR1EP28566 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.75□□□□□ -0.21
HTR1EP28566 AC025279.2-201ENST00000569730 653 ntBASIC13.75□□□□□ -0.21
HTR1EP28566 MIR4741-201ENST00000579822 90 ntBASIC13.75□□□□□ -0.21
HTR1EP28566 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.75□□□□□ -0.21
HTR1EP28566 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HTR1EP28566 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.75□□□□□ -0.21
HTR1EP28566 AC138951.2-201ENST00000623455 1161 ntBASIC13.75□□□□□ -0.21
HTR1EP28566 AC015967.2-201ENST00000624092 234 ntBASIC13.75□□□□□ -0.21
HTR1EP28566 AC006435.4-201ENST00000625037 234 ntBASIC13.75□□□□□ -0.21
HTR1EP28566 AL356737.1-201ENST00000634391 234 ntBASIC13.75□□□□□ -0.21
HTR1EP28566 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
HTR1EP28566 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
HTR1EP28566 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
HTR1EP28566 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.75□□□□□ -0.21
HTR1EP28566 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.75□□□□□ -0.21
HTR1EP28566 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC13.75□□□□□ -0.21
HTR1EP28566 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HTR1EP28566 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HTR1EP28566 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.75□□□□□ -0.21
HTR1EP28566 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HTR1EP28566 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HTR1EP28566 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HTR1EP28566 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HTR1EP28566 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HTR1EP28566 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HTR1EP28566 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HTR1EP28566 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC13.75□□□□□ -0.21
HTR1EP28566 AC009474.1-201ENST00000455096 1565 ntBASIC13.75□□□□□ -0.21
HTR1EP28566 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HTR1EP28566 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HTR1EP28566 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HTR1EP28566 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC13.74□□□□□ -0.21
HTR1EP28566 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HTR1EP28566 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
HTR1EP28566 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HTR1EP28566 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.74□□□□□ -0.21
HTR1EP28566 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HTR1EP28566 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.74□□□□□ -0.21
HTR1EP28566 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HTR1EP28566 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms