Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD40P25942 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC12.3□□□□□ -0.44
CD40P25942 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.3□□□□□ -0.44
CD40P25942 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD40P25942 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CD40P25942 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD40P25942 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.3□□□□□ -0.44
CD40P25942 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD40P25942 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.3□□□□□ -0.44
CD40P25942 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CD40P25942 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD40P25942 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD40P25942 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.3□□□□□ -0.44
CD40P25942 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC12.3□□□□□ -0.44
CD40P25942 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC12.3□□□□□ -0.44
CD40P25942 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.3□□□□□ -0.44
CD40P25942 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CD40P25942 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC12.3□□□□□ -0.44
CD40P25942 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
CD40P25942 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD40P25942 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD40P25942 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD40P25942 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CD40P25942 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD40P25942 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
CD40P25942 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.29□□□□□ -0.44
CD40P25942 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD40P25942 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD40P25942 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD40P25942 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CD40P25942 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CD40P25942 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC12.29□□□□□ -0.44
CD40P25942 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD40P25942 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD40P25942 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CD40P25942 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD40P25942 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC12.29□□□□□ -0.44
CD40P25942 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.29□□□□□ -0.44
CD40P25942 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD40P25942 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD40P25942 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CD40P25942 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD40P25942 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD40P25942 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.29□□□□□ -0.44
CD40P25942 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD40P25942 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
CD40P25942 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD40P25942 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC12.29□□□□□ -0.44
CD40P25942 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CD40P25942 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.29□□□□□ -0.44
CD40P25942 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD40P25942 AC103592.1-201ENST00000394513 664 ntBASIC12.29□□□□□ -0.44
CD40P25942 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD40P25942 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC12.29□□□□□ -0.44
CD40P25942 DNAJB1P1-201ENST00000429417 1024 ntBASIC12.29□□□□□ -0.44
CD40P25942 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC12.29□□□□□ -0.44
CD40P25942 KRT18P15-201ENST00000458108 1291 ntBASIC12.29□□□□□ -0.44
CD40P25942 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC12.29□□□□□ -0.44
CD40P25942 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CD40P25942 AP002803.1-201ENST00000528836 498 ntBASIC12.29□□□□□ -0.44
CD40P25942 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC12.29□□□□□ -0.44
CD40P25942 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD40P25942 AC138701.2-201ENST00000553634 226 ntBASIC12.29□□□□□ -0.44
CD40P25942 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.29□□□□□ -0.44
CD40P25942 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD40P25942 NDUFB10P1-201ENST00000567319 521 ntBASIC12.29□□□□□ -0.44
CD40P25942 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC12.29□□□□□ -0.44
CD40P25942 AL133467.4-201ENST00000602953 725 ntBASIC12.29□□□□□ -0.44
CD40P25942 AC092171.5-201ENST00000608012 942 ntBASIC12.29□□□□□ -0.44
CD40P25942 CMC2-224ENST00000630396 481 ntTSL 5 BASIC12.29□□□□□ -0.44
CD40P25942 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC12.29□□□□□ -0.44
CD40P25942 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
CD40P25942 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD40P25942 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CD40P25942 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
CD40P25942 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD40P25942 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD40P25942 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD40P25942 AL591122.2-201ENST00000624125 1853 ntBASIC12.29□□□□□ -0.44
CD40P25942 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD40P25942 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD40P25942 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD40P25942 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD40P25942 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD40P25942 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD40P25942 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CD40P25942 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
CD40P25942 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC12.29□□□□□ -0.44
CD40P25942 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD40P25942 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC12.29□□□□□ -0.44
CD40P25942 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD40P25942 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CD40P25942 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD40P25942 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD40P25942 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD40P25942 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD40P25942 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD40P25942 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
CD40P25942 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD40P25942 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms