Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.44□□□□□ -0.26
CHMP24386 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.44□□□□□ -0.26
CHMP24386 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.44□□□□□ -0.26
CHMP24386 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CHMP24386 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CHMP24386 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CHMP24386 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.44□□□□□ -0.26
CHMP24386 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CHMP24386 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CHMP24386 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CHMP24386 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CHMP24386 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.44□□□□□ -0.26
CHMP24386 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CHMP24386 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
CHMP24386 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
CHMP24386 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CHMP24386 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.44□□□□□ -0.26
CHMP24386 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CHMP24386 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CHMP24386 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CHMP24386 AC114271.1-201ENST00000612689 2813 ntBASIC13.44□□□□□ -0.26
CHMP24386 AC118758.2-201ENST00000614242 2813 ntBASIC13.44□□□□□ -0.26
CHMP24386 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CHMP24386 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CHMP24386 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CHMP24386 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CHMP24386 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CHMP24386 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CHMP24386 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
CHMP24386 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
CHMP24386 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHMP24386 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CHMP24386 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.43□□□□□ -0.26
CHMP24386 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC13.43□□□□□ -0.26
CHMP24386 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.43□□□□□ -0.26
CHMP24386 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHMP24386 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
CHMP24386 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHMP24386 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHMP24386 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
CHMP24386 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHMP24386 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CHMP24386 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.43□□□□□ -0.26
CHMP24386 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CHMP24386 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHMP24386 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.43□□□□□ -0.26
CHMP24386 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CHMP24386 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHMP24386 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CHMP24386 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
CHMP24386 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHMP24386 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CHMP24386 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CHMP24386 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHMP24386 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.43□□□□□ -0.26
CHMP24386 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.43□□□□□ -0.26
CHMP24386 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.43□□□□□ -0.26
CHMP24386 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.43□□□□□ -0.26
CHMP24386 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CHMP24386 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHMP24386 HSPB1P2-201ENST00000448722 546 ntBASIC13.43□□□□□ -0.26
CHMP24386 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC13.43□□□□□ -0.26
CHMP24386 AL591846.1-201ENST00000451736 433 ntBASIC13.43□□□□□ -0.26
CHMP24386 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.43□□□□□ -0.26
CHMP24386 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHMP24386 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CHMP24386 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.43□□□□□ -0.26
CHMP24386 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.43□□□□□ -0.26
CHMP24386 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.43□□□□□ -0.26
CHMP24386 MIR4683-201ENST00000579659 81 ntBASIC13.43□□□□□ -0.26
CHMP24386 MIR4538-201ENST00000581377 78 ntBASIC13.43□□□□□ -0.26
CHMP24386 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC13.43□□□□□ -0.26
CHMP24386 AL358472.3-201ENST00000608147 415 ntBASIC13.43□□□□□ -0.26
CHMP24386 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC13.43□□□□□ -0.26
CHMP24386 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CHMP24386 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.43□□□□□ -0.26
CHMP24386 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.43□□□□□ -0.26
CHMP24386 AP001002.3-201ENST00000623482 206 ntBASIC13.43□□□□□ -0.26
CHMP24386 AC020910.5-201ENST00000623668 1865 ntBASIC13.43□□□□□ -0.26
CHMP24386 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHMP24386 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
CHMP24386 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CHMP24386 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHMP24386 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.43□□□□□ -0.26
CHMP24386 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CHMP24386 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHMP24386 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHMP24386 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
CHMP24386 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CHMP24386 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.43□□□□□ -0.26
CHMP24386 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.43□□□□□ -0.26
CHMP24386 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHMP24386 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHMP24386 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CHMP24386 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.43□□□□□ -0.26
CHMP24386 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CHMP24386 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CHMP24386 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
CHMP24386 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
CHMP24386 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms