Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
RAB3BP20337 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB3BP20337 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB3BP20337 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RAB3BP20337 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RAB3BP20337 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB3BP20337 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB3BP20337 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB3BP20337 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB3BP20337 REXO1L1P-201ENST00000379010 6598 ntBASIC12.59□□□□□ -0.39
RAB3BP20337 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC12.59□□□□□ -0.39
RAB3BP20337 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
RAB3BP20337 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.59□□□□□ -0.39
RAB3BP20337 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB3BP20337 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
RAB3BP20337 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
RAB3BP20337 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
RAB3BP20337 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC12.58□□□□□ -0.4
RAB3BP20337 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RAB3BP20337 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB3BP20337 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB3BP20337 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.58□□□□□ -0.4
RAB3BP20337 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB3BP20337 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB3BP20337 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RAB3BP20337 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RAB3BP20337 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB3BP20337 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB3BP20337 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB3BP20337 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB3BP20337 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB3BP20337 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB3BP20337 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB3BP20337 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC12.58□□□□□ -0.4
RAB3BP20337 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RAB3BP20337 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
RAB3BP20337 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB3BP20337 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC12.58□□□□□ -0.4
RAB3BP20337 SOCS2P1-201ENST00000417727 557 ntBASIC12.58□□□□□ -0.4
RAB3BP20337 AC241585.1-201ENST00000433527 519 ntBASIC12.58□□□□□ -0.4
RAB3BP20337 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.58□□□□□ -0.4
RAB3BP20337 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB3BP20337 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC12.58□□□□□ -0.4
RAB3BP20337 KRT18P25-201ENST00000508931 1278 ntBASIC12.58□□□□□ -0.4
RAB3BP20337 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB3BP20337 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB3BP20337 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC12.58□□□□□ -0.4
RAB3BP20337 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RAB3BP20337 AC023310.3-201ENST00000557027 670 ntBASIC12.58□□□□□ -0.4
RAB3BP20337 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.58□□□□□ -0.4
RAB3BP20337 AC100756.1-201ENST00000562736 682 ntBASIC12.58□□□□□ -0.4
RAB3BP20337 AC138749.3-201ENST00000567691 622 ntBASIC12.58□□□□□ -0.4
RAB3BP20337 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC12.58□□□□□ -0.4
RAB3BP20337 AC116165.1-201ENST00000611806 668 ntBASIC12.58□□□□□ -0.4
RAB3BP20337 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
RAB3BP20337 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC12.58□□□□□ -0.4
RAB3BP20337 AC009093.10-201ENST00000641956 1442 ntBASIC12.58□□□□□ -0.4
RAB3BP20337 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC12.58□□□□□ -0.4
RAB3BP20337 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
RAB3BP20337 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
RAB3BP20337 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.58□□□□□ -0.4
RAB3BP20337 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
RAB3BP20337 CLUHP2-201ENST00000426660 1303 ntBASIC12.58□□□□□ -0.4
RAB3BP20337 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB3BP20337 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
RAB3BP20337 CICP1-201ENST00000416803 2410 ntBASIC12.58□□□□□ -0.4
RAB3BP20337 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB3BP20337 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC12.58□□□□□ -0.4
RAB3BP20337 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB3BP20337 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RAB3BP20337 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RAB3BP20337 AC026271.4-201ENST00000578214 1833 ntBASIC12.58□□□□□ -0.4
RAB3BP20337 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC12.58□□□□□ -0.4
RAB3BP20337 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.57□□□□□ -0.4
RAB3BP20337 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RAB3BP20337 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB3BP20337 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB3BP20337 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RAB3BP20337 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB3BP20337 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC12.57□□□□□ -0.4
RAB3BP20337 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC12.57□□□□□ -0.4
RAB3BP20337 USP39-207ENST00000450066 2086 ntTSL 2 BASIC12.57□□□□□ -0.4
RAB3BP20337 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC12.57□□□□□ -0.4
RAB3BP20337 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC12.57□□□□□ -0.4
RAB3BP20337 AL805961.2-201ENST00000642139 4817 ntBASIC12.57□□□□□ -0.4
RAB3BP20337 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RAB3BP20337 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC12.57□□□□□ -0.4
RAB3BP20337 METTL26-204ENST00000397665 558 ntTSL 2 BASIC12.57□□□□□ -0.4
RAB3BP20337 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC12.57□□□□□ -0.4
RAB3BP20337 RPSAP43-201ENST00000402237 625 ntBASIC12.57□□□□□ -0.4
RAB3BP20337 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
RAB3BP20337 TREML5P-201ENST00000421694 576 ntBASIC12.57□□□□□ -0.4
RAB3BP20337 TSSK5P-201ENST00000423978 907 ntBASIC12.57□□□□□ -0.4
RAB3BP20337 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC12.57□□□□□ -0.4
RAB3BP20337 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
RAB3BP20337 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RAB3BP20337 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RAB3BP20337 STOM-203ENST00000538954 1257 ntTSL 5 BASIC12.57□□□□□ -0.4
RAB3BP20337 AC124283.3-201ENST00000570869 594 ntBASIC12.57□□□□□ -0.4
RAB3BP20337 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms