Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NFKB1P19838 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NFKB1P19838 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.54□□□□□ -0.08
NFKB1P19838 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NFKB1P19838 BRWD1P1-201ENST00000401091 371 ntBASIC14.54□□□□□ -0.08
NFKB1P19838 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.54□□□□□ -0.08
NFKB1P19838 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
NFKB1P19838 AC009779.1-201ENST00000551138 283 ntBASIC14.54□□□□□ -0.08
NFKB1P19838 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14.54□□□□□ -0.08
NFKB1P19838 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.54□□□□□ -0.08
NFKB1P19838 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.54□□□□□ -0.08
NFKB1P19838 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NFKB1P19838 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
NFKB1P19838 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NFKB1P19838 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NFKB1P19838 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC14.54□□□□□ -0.08
NFKB1P19838 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.54□□□□□ -0.08
NFKB1P19838 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.54□□□□□ -0.08
NFKB1P19838 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NFKB1P19838 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NFKB1P19838 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NFKB1P19838 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NFKB1P19838 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC14.54□□□□□ -0.08
NFKB1P19838 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
NFKB1P19838 GOLGA8IP-202ENST00000611635 2100 ntBASIC14.54□□□□□ -0.08
NFKB1P19838 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
NFKB1P19838 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.54□□□□□ -0.08
NFKB1P19838 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NFKB1P19838 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.54□□□□□ -0.08
NFKB1P19838 AL365181.3-201ENST00000605886 3222 ntBASIC14.54□□□□□ -0.08
NFKB1P19838 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NFKB1P19838 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
NFKB1P19838 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NFKB1P19838 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NFKB1P19838 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NFKB1P19838 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NFKB1P19838 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.53□□□□□ -0.08
NFKB1P19838 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NFKB1P19838 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NFKB1P19838 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NFKB1P19838 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NFKB1P19838 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.53□□□□□ -0.08
NFKB1P19838 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
NFKB1P19838 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NFKB1P19838 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.53□□□□□ -0.08
NFKB1P19838 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
NFKB1P19838 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.53□□□□□ -0.08
NFKB1P19838 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NFKB1P19838 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.53□□□□□ -0.08
NFKB1P19838 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.53□□□□□ -0.08
NFKB1P19838 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.53□□□□□ -0.08
NFKB1P19838 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NFKB1P19838 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.53□□□□□ -0.08
NFKB1P19838 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NFKB1P19838 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
NFKB1P19838 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NFKB1P19838 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.53□□□□□ -0.08
NFKB1P19838 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NFKB1P19838 MIR1908-201ENST00000410394 80 ntBASIC14.53□□□□□ -0.08
NFKB1P19838 HMGA1P1-201ENST00000415560 1062 ntBASIC14.53□□□□□ -0.08
NFKB1P19838 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.53□□□□□ -0.08
NFKB1P19838 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.53□□□□□ -0.08
NFKB1P19838 AC005740.2-201ENST00000511085 419 ntBASIC14.53□□□□□ -0.08
NFKB1P19838 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.53□□□□□ -0.08
NFKB1P19838 AC044849.1-201ENST00000519737 1188 ntBASIC14.53□□□□□ -0.08
NFKB1P19838 AC126915.1-201ENST00000522847 1038 ntBASIC14.53□□□□□ -0.08
NFKB1P19838 AC013355.1-201ENST00000562625 723 ntBASIC14.53□□□□□ -0.08
NFKB1P19838 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.53□□□□□ -0.08
NFKB1P19838 AL157813.1-201ENST00000612996 587 ntBASIC14.53□□□□□ -0.08
NFKB1P19838 AL136295.7-201ENST00000619226 1200 ntBASIC14.53□□□□□ -0.08
NFKB1P19838 AL008638.5-201ENST00000623814 1298 ntBASIC14.53□□□□□ -0.08
NFKB1P19838 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NFKB1P19838 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.53□□□□□ -0.08
NFKB1P19838 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NFKB1P19838 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NFKB1P19838 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.53□□□□□ -0.08
NFKB1P19838 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
NFKB1P19838 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
NFKB1P19838 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
NFKB1P19838 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NFKB1P19838 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NFKB1P19838 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
NFKB1P19838 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NFKB1P19838 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
NFKB1P19838 AC015909.5-201ENST00000624336 2266 ntBASIC14.53□□□□□ -0.08
NFKB1P19838 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
NFKB1P19838 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NFKB1P19838 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC14.53□□□□□ -0.08
NFKB1P19838 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NFKB1P19838 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NFKB1P19838 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.53□□□□□ -0.08
NFKB1P19838 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NFKB1P19838 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
NFKB1P19838 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NFKB1P19838 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
NFKB1P19838 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NFKB1P19838 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC14.52□□□□□ -0.08
NFKB1P19838 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NFKB1P19838 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NFKB1P19838 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms