Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
APPP05067 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
APPP05067 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC17.19■□□□□ 0.34
APPP05067 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
APPP05067 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
APPP05067 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
APPP05067 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
APPP05067 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
APPP05067 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
APPP05067 RNA5SP359-201ENST00000364838 113 ntBASIC17.19■□□□□ 0.34
APPP05067 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
APPP05067 AL662890.1-201ENST00000396818 632 ntBASIC17.19■□□□□ 0.34
APPP05067 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
APPP05067 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC17.19■□□□□ 0.34
APPP05067 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC17.19■□□□□ 0.34
APPP05067 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.19■□□□□ 0.34
APPP05067 POU5F1P2-201ENST00000521750 823 ntBASIC17.19■□□□□ 0.34
APPP05067 IGHV3OR16-16-201ENST00000563644 343 ntBASIC17.19■□□□□ 0.34
APPP05067 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
APPP05067 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC17.19■□□□□ 0.34
APPP05067 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC17.19■□□□□ 0.34
APPP05067 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17.19■□□□□ 0.34
APPP05067 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
APPP05067 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
APPP05067 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
APPP05067 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
APPP05067 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
APPP05067 AC152010.1-201ENST00000415779 2006 ntBASIC17.19■□□□□ 0.34
APPP05067 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
APPP05067 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC17.19■□□□□ 0.34
APPP05067 CCT8L1P-201ENST00000465400 1674 ntBASIC17.19■□□□□ 0.34
APPP05067 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC17.19■□□□□ 0.34
APPP05067 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
APPP05067 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
APPP05067 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC17.19■□□□□ 0.34
APPP05067 FRMPD2B-201ENST00000431305 1347 ntBASIC17.19■□□□□ 0.34
APPP05067 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
APPP05067 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
APPP05067 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC17.19■□□□□ 0.34
APPP05067 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC17.18■□□□□ 0.34
APPP05067 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
APPP05067 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
APPP05067 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC17.18■□□□□ 0.34
APPP05067 AC020910.6-201ENST00000623084 1459 ntBASIC17.18■□□□□ 0.34
APPP05067 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
APPP05067 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
APPP05067 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC17.18■□□□□ 0.34
APPP05067 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
APPP05067 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
APPP05067 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
APPP05067 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
APPP05067 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
APPP05067 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
APPP05067 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
APPP05067 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
APPP05067 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
APPP05067 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
APPP05067 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC17.18■□□□□ 0.34
APPP05067 RN7SL277P-201ENST00000481521 288 ntBASIC17.18■□□□□ 0.34
APPP05067 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC17.18■□□□□ 0.34
APPP05067 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC17.18■□□□□ 0.34
APPP05067 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.18■□□□□ 0.34
APPP05067 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
APPP05067 AL161670.2-201ENST00000557650 1227 ntBASIC17.18■□□□□ 0.34
APPP05067 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC17.18■□□□□ 0.34
APPP05067 MIR3619-201ENST00000579667 83 ntBASIC17.18■□□□□ 0.34
APPP05067 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC17.18■□□□□ 0.34
APPP05067 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
APPP05067 AC138627.1-207ENST00000641560 1006 ntBASIC17.18■□□□□ 0.34
APPP05067 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
APPP05067 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
APPP05067 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
APPP05067 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC17.18■□□□□ 0.34
APPP05067 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
APPP05067 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
APPP05067 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
APPP05067 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
APPP05067 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
APPP05067 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
APPP05067 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
APPP05067 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
APPP05067 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC17.18■□□□□ 0.34
APPP05067 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
APPP05067 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
APPP05067 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
APPP05067 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
APPP05067 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
APPP05067 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
APPP05067 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
APPP05067 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
APPP05067 AL031595.1-201ENST00000623969 4709 ntBASIC17.18■□□□□ 0.34
APPP05067 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC17.17■□□□□ 0.34
APPP05067 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
APPP05067 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
APPP05067 AC005089.1-201ENST00000619486 2241 ntBASIC17.17■□□□□ 0.34
APPP05067 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
APPP05067 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
APPP05067 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
APPP05067 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
APPP05067 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms