Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
GAPDHP04406 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
GAPDHP04406 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
GAPDHP04406 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
GAPDHP04406 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
GAPDHP04406 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
GAPDHP04406 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
GAPDHP04406 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
GAPDHP04406 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
GAPDHP04406 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
GAPDHP04406 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.04□□□□□ -0.48
GAPDHP04406 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
GAPDHP04406 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
GAPDHP04406 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC12.04□□□□□ -0.48
GAPDHP04406 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC12.04□□□□□ -0.48
GAPDHP04406 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.04□□□□□ -0.48
GAPDHP04406 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.04□□□□□ -0.48
GAPDHP04406 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
GAPDHP04406 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
GAPDHP04406 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
GAPDHP04406 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
GAPDHP04406 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
GAPDHP04406 RN7SKP175-201ENST00000408472 289 ntBASIC12.04□□□□□ -0.48
GAPDHP04406 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
GAPDHP04406 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.04□□□□□ -0.48
GAPDHP04406 AL391280.1-201ENST00000506969 1062 ntBASIC12.04□□□□□ -0.48
GAPDHP04406 COX5BP1-201ENST00000507622 393 ntBASIC12.04□□□□□ -0.48
GAPDHP04406 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC12.04□□□□□ -0.48
GAPDHP04406 ALG3P1-201ENST00000508806 1114 ntBASIC12.04□□□□□ -0.48
GAPDHP04406 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC12.04□□□□□ -0.48
GAPDHP04406 AP000812.2-201ENST00000538934 718 ntBASIC12.04□□□□□ -0.48
GAPDHP04406 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
GAPDHP04406 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC12.04□□□□□ -0.48
GAPDHP04406 AC023310.1-201ENST00000554836 735 ntBASIC12.04□□□□□ -0.48
GAPDHP04406 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC12.04□□□□□ -0.48
GAPDHP04406 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC12.04□□□□□ -0.48
GAPDHP04406 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC12.04□□□□□ -0.48
GAPDHP04406 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC12.04□□□□□ -0.48
GAPDHP04406 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC12.04□□□□□ -0.48
GAPDHP04406 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC12.04□□□□□ -0.48
GAPDHP04406 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
GAPDHP04406 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
GAPDHP04406 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
GAPDHP04406 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
GAPDHP04406 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
GAPDHP04406 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC12.04□□□□□ -0.48
GAPDHP04406 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
GAPDHP04406 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
GAPDHP04406 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.04□□□□□ -0.48
GAPDHP04406 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
GAPDHP04406 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.04□□□□□ -0.48
GAPDHP04406 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
GAPDHP04406 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
GAPDHP04406 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
GAPDHP04406 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
GAPDHP04406 AC020910.5-201ENST00000623668 1865 ntBASIC12.04□□□□□ -0.48
GAPDHP04406 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.04□□□□□ -0.48
GAPDHP04406 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC12.03□□□□□ -0.48
GAPDHP04406 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
GAPDHP04406 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
GAPDHP04406 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
GAPDHP04406 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.03□□□□□ -0.48
GAPDHP04406 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
GAPDHP04406 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
GAPDHP04406 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
GAPDHP04406 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
GAPDHP04406 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC12.03□□□□□ -0.48
GAPDHP04406 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.03□□□□□ -0.48
GAPDHP04406 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
GAPDHP04406 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
GAPDHP04406 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
GAPDHP04406 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
GAPDHP04406 PDIA3P1-201ENST00000471856 1510 ntBASIC12.03□□□□□ -0.48
GAPDHP04406 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.03□□□□□ -0.48
GAPDHP04406 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
GAPDHP04406 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
GAPDHP04406 AL365181.3-201ENST00000605886 3222 ntBASIC12.03□□□□□ -0.48
GAPDHP04406 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
GAPDHP04406 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
GAPDHP04406 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
GAPDHP04406 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
GAPDHP04406 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
GAPDHP04406 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
GAPDHP04406 MIR1202-201ENST00000408529 83 ntBASIC12.03□□□□□ -0.48
GAPDHP04406 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
GAPDHP04406 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.03□□□□□ -0.48
GAPDHP04406 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC12.03□□□□□ -0.48
GAPDHP04406 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC12.03□□□□□ -0.48
GAPDHP04406 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
GAPDHP04406 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC12.03□□□□□ -0.48
GAPDHP04406 RN7SL713P-201ENST00000582127 302 ntBASIC12.03□□□□□ -0.48
GAPDHP04406 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.03□□□□□ -0.48
GAPDHP04406 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
GAPDHP04406 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
GAPDHP04406 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
GAPDHP04406 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC12.03□□□□□ -0.48
GAPDHP04406 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
GAPDHP04406 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
GAPDHP04406 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
GAPDHP04406 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 432.2 ms