Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
ALX3O95076 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC12.77□□□□□ -0.37
ALX3O95076 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC12.77□□□□□ -0.37
ALX3O95076 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ALX3O95076 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ALX3O95076 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
ALX3O95076 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ALX3O95076 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ALX3O95076 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ALX3O95076 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ALX3O95076 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.77□□□□□ -0.37
ALX3O95076 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
ALX3O95076 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ALX3O95076 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.37
ALX3O95076 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ALX3O95076 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.77□□□□□ -0.37
ALX3O95076 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
ALX3O95076 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.77□□□□□ -0.37
ALX3O95076 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
ALX3O95076 PTGR2-204ENST00000555228 2543 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
ALX3O95076 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
ALX3O95076 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ALX3O95076 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ALX3O95076 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC12.76□□□□□ -0.37
ALX3O95076 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ALX3O95076 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.76□□□□□ -0.37
ALX3O95076 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ALX3O95076 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC12.76□□□□□ -0.37
ALX3O95076 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC12.76□□□□□ -0.37
ALX3O95076 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ALX3O95076 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
ALX3O95076 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
ALX3O95076 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.76□□□□□ -0.37
ALX3O95076 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ALX3O95076 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ALX3O95076 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ALX3O95076 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ALX3O95076 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
ALX3O95076 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ALX3O95076 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ALX3O95076 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ALX3O95076 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ALX3O95076 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ALX3O95076 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ALX3O95076 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ALX3O95076 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
ALX3O95076 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC12.76□□□□□ -0.37
ALX3O95076 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ALX3O95076 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ALX3O95076 MIR661-201ENST00000384842 89 ntBASIC12.76□□□□□ -0.37
ALX3O95076 AC012497.1-201ENST00000429392 575 ntBASIC12.76□□□□□ -0.37
ALX3O95076 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
ALX3O95076 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.76□□□□□ -0.37
ALX3O95076 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ALX3O95076 MESTP3-201ENST00000503460 968 ntBASIC12.76□□□□□ -0.37
ALX3O95076 AC022137.2-201ENST00000503482 481 ntBASIC12.76□□□□□ -0.37
ALX3O95076 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ALX3O95076 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC12.76□□□□□ -0.37
ALX3O95076 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.76□□□□□ -0.37
ALX3O95076 AC123567.1-201ENST00000548294 1261 ntBASIC12.76□□□□□ -0.37
ALX3O95076 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.76□□□□□ -0.37
ALX3O95076 AC010326.4-201ENST00000604665 891 ntBASIC12.76□□□□□ -0.37
ALX3O95076 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.76□□□□□ -0.37
ALX3O95076 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ALX3O95076 SNX12-206ENST00000622259 661 ntTSL 5 BASIC12.76□□□□□ -0.37
ALX3O95076 AC005252.2-201ENST00000624630 1141 ntBASIC12.76□□□□□ -0.37
ALX3O95076 AC025048.6-201ENST00000634326 1161 ntBASIC12.76□□□□□ -0.37
ALX3O95076 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ALX3O95076 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ALX3O95076 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.76□□□□□ -0.37
ALX3O95076 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC12.76□□□□□ -0.37
ALX3O95076 EGFR-AS1-201ENST00000442411 2806 ntTSL 2 BASIC12.76□□□□□ -0.37
ALX3O95076 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ALX3O95076 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
ALX3O95076 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
ALX3O95076 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC12.76□□□□□ -0.37
ALX3O95076 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ALX3O95076 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ALX3O95076 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC12.76□□□□□ -0.37
ALX3O95076 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
ALX3O95076 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ALX3O95076 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ALX3O95076 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ALX3O95076 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC12.76□□□□□ -0.37
ALX3O95076 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
ALX3O95076 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ALX3O95076 PHYHIP-201ENST00000321613 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ALX3O95076 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ALX3O95076 PAM-203ENST00000346918 3302 ntTSL 5 BASIC12.75□□□□□ -0.37
ALX3O95076 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
ALX3O95076 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ALX3O95076 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ALX3O95076 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ALX3O95076 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ALX3O95076 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ALX3O95076 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ALX3O95076 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ALX3O95076 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
ALX3O95076 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC12.75□□□□□ -0.37
ALX3O95076 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms