Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.43□□□□□ -0.1
GPC4O75487 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.43□□□□□ -0.1
GPC4O75487 MIR4741-201ENST00000579822 90 ntBASIC14.43□□□□□ -0.1
GPC4O75487 MIR4783-201ENST00000580343 82 ntBASIC14.43□□□□□ -0.1
GPC4O75487 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.43□□□□□ -0.1
GPC4O75487 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.43□□□□□ -0.1
GPC4O75487 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GPC4O75487 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
GPC4O75487 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.43□□□□□ -0.1
GPC4O75487 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GPC4O75487 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
GPC4O75487 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.43□□□□□ -0.1
GPC4O75487 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GPC4O75487 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
GPC4O75487 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
GPC4O75487 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GPC4O75487 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GPC4O75487 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GPC4O75487 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC14.43□□□□□ -0.1
GPC4O75487 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.43□□□□□ -0.1
GPC4O75487 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GPC4O75487 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.43□□□□□ -0.1
GPC4O75487 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
GPC4O75487 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GPC4O75487 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GPC4O75487 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GPC4O75487 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GPC4O75487 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.42□□□□□ -0.1
GPC4O75487 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
GPC4O75487 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GPC4O75487 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.42□□□□□ -0.1
GPC4O75487 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
GPC4O75487 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GPC4O75487 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GPC4O75487 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GPC4O75487 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.42□□□□□ -0.1
GPC4O75487 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.42□□□□□ -0.1
GPC4O75487 AL583810.1-201ENST00000553344 1045 ntBASIC14.42□□□□□ -0.1
GPC4O75487 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.42□□□□□ -0.1
GPC4O75487 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
GPC4O75487 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.42□□□□□ -0.1
GPC4O75487 AC132192.2-201ENST00000596206 1147 ntBASIC14.42□□□□□ -0.1
GPC4O75487 AC009955.4-201ENST00000597192 544 ntBASIC14.42□□□□□ -0.1
GPC4O75487 AC010328.2-201ENST00000597698 1111 ntBASIC14.42□□□□□ -0.1
GPC4O75487 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.42□□□□□ -0.1
GPC4O75487 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.42□□□□□ -0.1
GPC4O75487 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.42□□□□□ -0.1
GPC4O75487 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GPC4O75487 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
GPC4O75487 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GPC4O75487 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GPC4O75487 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GPC4O75487 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GPC4O75487 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
GPC4O75487 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
GPC4O75487 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GPC4O75487 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.41□□□□□ -0.1
GPC4O75487 E2F3P2-201ENST00000447755 1422 ntBASIC14.41□□□□□ -0.1
GPC4O75487 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
GPC4O75487 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
GPC4O75487 AC009093.10-201ENST00000641956 1442 ntBASIC14.41□□□□□ -0.1
GPC4O75487 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.41□□□□□ -0.1
GPC4O75487 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GPC4O75487 AC015818.8-201ENST00000587907 1519 ntBASIC14.41□□□□□ -0.1
GPC4O75487 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GPC4O75487 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GPC4O75487 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GPC4O75487 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
GPC4O75487 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.41□□□□□ -0.1
GPC4O75487 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GPC4O75487 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GPC4O75487 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.41□□□□□ -0.1
GPC4O75487 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.41□□□□□ -0.1
GPC4O75487 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.41□□□□□ -0.1
GPC4O75487 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.41□□□□□ -0.1
GPC4O75487 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GPC4O75487 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.41□□□□□ -0.1
GPC4O75487 TMEM198B-204ENST00000484016 896 ntBASIC14.41□□□□□ -0.1
GPC4O75487 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.41□□□□□ -0.1
GPC4O75487 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GPC4O75487 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.41□□□□□ -0.1
GPC4O75487 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.41□□□□□ -0.1
GPC4O75487 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.41□□□□□ -0.1
GPC4O75487 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
GPC4O75487 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GPC4O75487 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
GPC4O75487 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GPC4O75487 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.41□□□□□ -0.1
GPC4O75487 AL359881.2-201ENST00000602973 570 ntBASIC14.41□□□□□ -0.1
GPC4O75487 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.41□□□□□ -0.1
GPC4O75487 AC009542.2-202ENST00000619004 1067 ntBASIC14.41□□□□□ -0.1
GPC4O75487 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.41□□□□□ -0.1
GPC4O75487 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.41□□□□□ -0.1
GPC4O75487 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GPC4O75487 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
GPC4O75487 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
GPC4O75487 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GPC4O75487 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
GPC4O75487 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GPC4O75487 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms