Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SMAD6O43541 AC068760.1-201ENST00000493579 1953 ntBASIC14.35□□□□□ -0.11
SMAD6O43541 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SMAD6O43541 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMAD6O43541 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SMAD6O43541 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC14.35□□□□□ -0.11
SMAD6O43541 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMAD6O43541 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMAD6O43541 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC14.35□□□□□ -0.11
SMAD6O43541 NOC2LP1-201ENST00000450578 752 ntBASIC14.35□□□□□ -0.11
SMAD6O43541 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SMAD6O43541 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SMAD6O43541 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMAD6O43541 POLD4-208ENST00000532830 904 ntTSL 3 BASIC14.35□□□□□ -0.11
SMAD6O43541 KLF17P1-201ENST00000547105 1126 ntBASIC14.35□□□□□ -0.11
SMAD6O43541 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC14.35□□□□□ -0.11
SMAD6O43541 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC14.35□□□□□ -0.11
SMAD6O43541 COG4-212ENST00000564653 590 ntTSL 5 BASIC14.35□□□□□ -0.11
SMAD6O43541 RN7SL665P-201ENST00000578793 300 ntBASIC14.35□□□□□ -0.11
SMAD6O43541 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC14.35□□□□□ -0.11
SMAD6O43541 AC073352.2-201ENST00000609385 439 ntBASIC14.35□□□□□ -0.11
SMAD6O43541 AC084781.1-201ENST00000613737 656 ntBASIC14.35□□□□□ -0.11
SMAD6O43541 BAP1-211ENST00000615113 489 ntBASIC14.35□□□□□ -0.11
SMAD6O43541 TP53-221ENST00000615910 1149 ntTSL 5 BASIC14.35□□□□□ -0.11
SMAD6O43541 AC242376.2-201ENST00000619355 883 ntBASIC14.35□□□□□ -0.11
SMAD6O43541 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SMAD6O43541 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMAD6O43541 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
SMAD6O43541 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SMAD6O43541 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
SMAD6O43541 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMAD6O43541 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
SMAD6O43541 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SMAD6O43541 AL590824.1-201ENST00000403828 1349 ntBASIC14.35□□□□□ -0.11
SMAD6O43541 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMAD6O43541 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMAD6O43541 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.35□□□□□ -0.11
SMAD6O43541 AC006372.4-201ENST00000624122 1543 ntBASIC14.35□□□□□ -0.11
SMAD6O43541 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMAD6O43541 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMAD6O43541 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMAD6O43541 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMAD6O43541 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMAD6O43541 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMAD6O43541 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.34□□□□□ -0.11
SMAD6O43541 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SMAD6O43541 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC14.34□□□□□ -0.11
SMAD6O43541 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMAD6O43541 DUT-208ENST00000559540 1441 ntTSL 2 BASIC14.34□□□□□ -0.11
SMAD6O43541 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMAD6O43541 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SMAD6O43541 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMAD6O43541 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMAD6O43541 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SMAD6O43541 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMAD6O43541 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC14.34□□□□□ -0.11
SMAD6O43541 CHCHD2P9-201ENST00000461726 456 ntBASIC14.34□□□□□ -0.11
SMAD6O43541 ORAOV1P1-201ENST00000503108 395 ntBASIC14.34□□□□□ -0.11
SMAD6O43541 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC14.34□□□□□ -0.11
SMAD6O43541 TPM1-223ENST00000560445 485 ntTSL 3 BASIC14.34□□□□□ -0.11
SMAD6O43541 MT3-203ENST00000565838 421 ntTSL 3 BASIC14.34□□□□□ -0.11
SMAD6O43541 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC14.34□□□□□ -0.11
SMAD6O43541 AC007881.3-201ENST00000608897 607 ntBASIC14.34□□□□□ -0.11
SMAD6O43541 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SMAD6O43541 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC14.34□□□□□ -0.11
SMAD6O43541 AC126755.1-201ENST00000525846 6405 ntBASIC14.34□□□□□ -0.11
SMAD6O43541 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMAD6O43541 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMAD6O43541 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC14.34□□□□□ -0.11
SMAD6O43541 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
SMAD6O43541 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMAD6O43541 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
SMAD6O43541 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.34□□□□□ -0.11
SMAD6O43541 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMAD6O43541 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
SMAD6O43541 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
SMAD6O43541 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SMAD6O43541 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
SMAD6O43541 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
SMAD6O43541 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SMAD6O43541 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SMAD6O43541 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SMAD6O43541 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SMAD6O43541 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
SMAD6O43541 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMAD6O43541 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SMAD6O43541 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SMAD6O43541 KRT8P43-201ENST00000406052 1458 ntBASIC14.33□□□□□ -0.12
SMAD6O43541 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMAD6O43541 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SMAD6O43541 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SMAD6O43541 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SMAD6O43541 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC14.33□□□□□ -0.12
SMAD6O43541 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SMAD6O43541 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC14.33□□□□□ -0.12
SMAD6O43541 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SMAD6O43541 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC14.33□□□□□ -0.12
SMAD6O43541 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SMAD6O43541 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SMAD6O43541 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms