Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LOC285556D6RIA3 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LOC285556D6RIA3 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LOC285556D6RIA3 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
LOC285556D6RIA3 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LOC285556D6RIA3 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
LOC285556D6RIA3 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LOC285556D6RIA3 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
LOC285556D6RIA3 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LOC285556D6RIA3 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LOC285556D6RIA3 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
LOC285556D6RIA3 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LOC285556D6RIA3 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LOC285556D6RIA3 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.75■□□□□ 0.11
LOC285556D6RIA3 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LOC285556D6RIA3 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LOC285556D6RIA3 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC15.75■□□□□ 0.11
LOC285556D6RIA3 MIR611-201ENST00000384869 67 ntBASIC15.75■□□□□ 0.11
LOC285556D6RIA3 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC15.75■□□□□ 0.11
LOC285556D6RIA3 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LOC285556D6RIA3 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC15.75■□□□□ 0.11
LOC285556D6RIA3 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC15.75■□□□□ 0.11
LOC285556D6RIA3 CTBP2P6-201ENST00000526402 1229 ntBASIC15.75■□□□□ 0.11
LOC285556D6RIA3 AP003040.1-201ENST00000532044 1024 ntBASIC15.75■□□□□ 0.11
LOC285556D6RIA3 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.75■□□□□ 0.11
LOC285556D6RIA3 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LOC285556D6RIA3 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC15.75■□□□□ 0.11
LOC285556D6RIA3 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC15.75■□□□□ 0.11
LOC285556D6RIA3 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LOC285556D6RIA3 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC15.74■□□□□ 0.11
LOC285556D6RIA3 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
LOC285556D6RIA3 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
LOC285556D6RIA3 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LOC285556D6RIA3 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LOC285556D6RIA3 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LOC285556D6RIA3 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LOC285556D6RIA3 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.74■□□□□ 0.11
LOC285556D6RIA3 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.74■□□□□ 0.11
LOC285556D6RIA3 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
LOC285556D6RIA3 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
LOC285556D6RIA3 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LOC285556D6RIA3 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC15.74■□□□□ 0.11
LOC285556D6RIA3 AC099524.1-203ENST00000565272 756 ntTSL 5 BASIC15.74■□□□□ 0.11
LOC285556D6RIA3 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
LOC285556D6RIA3 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC15.74■□□□□ 0.11
LOC285556D6RIA3 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LOC285556D6RIA3 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
LOC285556D6RIA3 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LOC285556D6RIA3 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
LOC285556D6RIA3 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.74■□□□□ 0.11
LOC285556D6RIA3 AC040160.2-201ENST00000623816 1675 ntBASIC15.74■□□□□ 0.11
LOC285556D6RIA3 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LOC285556D6RIA3 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LOC285556D6RIA3 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LOC285556D6RIA3 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LOC285556D6RIA3 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC15.73■□□□□ 0.11
LOC285556D6RIA3 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LOC285556D6RIA3 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
LOC285556D6RIA3 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LOC285556D6RIA3 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LOC285556D6RIA3 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LOC285556D6RIA3 RBP4-203ENST00000371469 814 ntTSL 5 BASIC15.73■□□□□ 0.11
LOC285556D6RIA3 AC098657.1-201ENST00000416270 1135 ntBASIC15.73■□□□□ 0.11
LOC285556D6RIA3 SERBP1P2-201ENST00000436888 1164 ntBASIC15.73■□□□□ 0.11
LOC285556D6RIA3 HNRNPA1P42-201ENST00000458678 957 ntBASIC15.73■□□□□ 0.11
LOC285556D6RIA3 SNRPD2P2-201ENST00000473818 333 ntBASIC15.73■□□□□ 0.11
LOC285556D6RIA3 AC092910.2-201ENST00000491262 348 ntBASIC15.73■□□□□ 0.11
LOC285556D6RIA3 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC15.73■□□□□ 0.11
LOC285556D6RIA3 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC15.73■□□□□ 0.11
LOC285556D6RIA3 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC15.73■□□□□ 0.11
LOC285556D6RIA3 AC009041.4-201ENST00000620075 638 ntBASIC15.73■□□□□ 0.11
LOC285556D6RIA3 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
LOC285556D6RIA3 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
LOC285556D6RIA3 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.73■□□□□ 0.11
LOC285556D6RIA3 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
LOC285556D6RIA3 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.73■□□□□ 0.11
LOC285556D6RIA3 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LOC285556D6RIA3 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LOC285556D6RIA3 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC15.73■□□□□ 0.11
LOC285556D6RIA3 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LOC285556D6RIA3 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LOC285556D6RIA3 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LOC285556D6RIA3 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.73■□□□□ 0.11
LOC285556D6RIA3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC15.72■□□□□ 0.11
LOC285556D6RIA3 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LOC285556D6RIA3 CCL19-202ENST00000378800 414 ntTSL 2 BASIC15.72■□□□□ 0.11
LOC285556D6RIA3 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
LOC285556D6RIA3 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LOC285556D6RIA3 CFL1P6-201ENST00000400899 494 ntBASIC15.72■□□□□ 0.11
LOC285556D6RIA3 AL121949.3-201ENST00000406684 385 ntBASIC15.72■□□□□ 0.11
LOC285556D6RIA3 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC15.72■□□□□ 0.11
LOC285556D6RIA3 AL773545.2-201ENST00000442149 472 ntBASIC15.72■□□□□ 0.11
LOC285556D6RIA3 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
LOC285556D6RIA3 SAA2-206ENST00000530400 323 ntTSL 3 BASIC15.72■□□□□ 0.11
LOC285556D6RIA3 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC15.72■□□□□ 0.11
LOC285556D6RIA3 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC15.72■□□□□ 0.11
LOC285556D6RIA3 AC106782.5-201ENST00000616011 337 ntBASIC15.72■□□□□ 0.11
LOC285556D6RIA3 AC008622.3-201ENST00000621170 600 ntBASIC15.72■□□□□ 0.11
LOC285556D6RIA3 AC020922.4-201ENST00000621389 339 ntBASIC15.72■□□□□ 0.11
LOC285556D6RIA3 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms