Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC66A2RUB6 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.61■□□□□ 0.09
CCDC66A2RUB6 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.61■□□□□ 0.09
CCDC66A2RUB6 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.61■□□□□ 0.09
CCDC66A2RUB6 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC66A2RUB6 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC66A2RUB6 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.61■□□□□ 0.09
CCDC66A2RUB6 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.61■□□□□ 0.09
CCDC66A2RUB6 AC131206.1-201ENST00000538078 1211 ntBASIC15.61■□□□□ 0.09
CCDC66A2RUB6 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.61■□□□□ 0.09
CCDC66A2RUB6 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.61■□□□□ 0.09
CCDC66A2RUB6 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.61■□□□□ 0.09
CCDC66A2RUB6 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.61■□□□□ 0.09
CCDC66A2RUB6 TCAM1P-207ENST00000485295 1537 ntBASIC15.61■□□□□ 0.09
CCDC66A2RUB6 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC66A2RUB6 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC66A2RUB6 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.61■□□□□ 0.09
CCDC66A2RUB6 MRPL37P1-201ENST00000592451 1337 ntBASIC15.61■□□□□ 0.09
CCDC66A2RUB6 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC66A2RUB6 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC66A2RUB6 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CCDC66A2RUB6 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC15.61■□□□□ 0.09
CCDC66A2RUB6 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC15.61■□□□□ 0.09
CCDC66A2RUB6 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC15.61■□□□□ 0.09
CCDC66A2RUB6 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CCDC66A2RUB6 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CCDC66A2RUB6 DLX4-206ENST00000611342 1662 ntBASIC15.6■□□□□ 0.09
CCDC66A2RUB6 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC66A2RUB6 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC66A2RUB6 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC66A2RUB6 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC66A2RUB6 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC66A2RUB6 AL357140.3-201ENST00000639753 1983 ntBASIC15.6■□□□□ 0.09
CCDC66A2RUB6 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC66A2RUB6 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC66A2RUB6 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC66A2RUB6 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CCDC66A2RUB6 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC15.6■□□□□ 0.09
CCDC66A2RUB6 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
CCDC66A2RUB6 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CCDC66A2RUB6 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC66A2RUB6 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.6■□□□□ 0.09
CCDC66A2RUB6 AC012617.1-204ENST00000586340 2305 ntBASIC15.6■□□□□ 0.09
CCDC66A2RUB6 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC66A2RUB6 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
CCDC66A2RUB6 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC66A2RUB6 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC66A2RUB6 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC66A2RUB6 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC66A2RUB6 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CCDC66A2RUB6 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CCDC66A2RUB6 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CCDC66A2RUB6 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.6■□□□□ 0.09
CCDC66A2RUB6 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC66A2RUB6 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.6■□□□□ 0.09
CCDC66A2RUB6 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.6■□□□□ 0.09
CCDC66A2RUB6 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC66A2RUB6 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CCDC66A2RUB6 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.6■□□□□ 0.09
CCDC66A2RUB6 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CCDC66A2RUB6 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC66A2RUB6 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC66A2RUB6 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC66A2RUB6 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC66A2RUB6 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC66A2RUB6 AC110048.1-201ENST00000604293 2157 ntBASIC15.6■□□□□ 0.09
CCDC66A2RUB6 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC66A2RUB6 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.6■□□□□ 0.09
CCDC66A2RUB6 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC66A2RUB6 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC66A2RUB6 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC66A2RUB6 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC66A2RUB6 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC66A2RUB6 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC15.59■□□□□ 0.09
CCDC66A2RUB6 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC66A2RUB6 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
CCDC66A2RUB6 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC66A2RUB6 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC66A2RUB6 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC66A2RUB6 AC092053.3-201ENST00000641308 4975 ntBASIC15.59■□□□□ 0.09
CCDC66A2RUB6 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC66A2RUB6 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC15.59■□□□□ 0.09
CCDC66A2RUB6 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC15.59■□□□□ 0.09
CCDC66A2RUB6 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC15.59■□□□□ 0.09
CCDC66A2RUB6 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC15.59■□□□□ 0.09
CCDC66A2RUB6 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
CCDC66A2RUB6 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC66A2RUB6 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC15.59■□□□□ 0.09
CCDC66A2RUB6 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC66A2RUB6 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC66A2RUB6 ACKR1-201ENST00000368121 1240 ntBASIC15.59■□□□□ 0.09
CCDC66A2RUB6 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CCDC66A2RUB6 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.59■□□□□ 0.09
CCDC66A2RUB6 DFFBP1-201ENST00000433250 979 ntBASIC15.59■□□□□ 0.09
CCDC66A2RUB6 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC66A2RUB6 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC66A2RUB6 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC66A2RUB6 SPCS2P1-201ENST00000561636 679 ntBASIC15.59■□□□□ 0.09
CCDC66A2RUB6 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.59■□□□□ 0.09
CCDC66A2RUB6 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms