Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 CD44-224ENST00000526669 870 ntTSL 5 BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 KRT8P2-201ENST00000556193 944 ntBASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 MIR5196-201ENST00000578146 115 ntBASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 CELP-201ENST00000411440 1249 ntTSL 5 BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 AC012362.1-201ENST00000434906 739 ntBASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 AL354861.1-201ENST00000445213 355 ntBASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 AP000911.2-201ENST00000534330 502 ntBASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 AL590824.1-201ENST00000403828 1349 ntBASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 NCLP1-201ENST00000445357 1963 ntBASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 RN7SL788P-201ENST00000460504 316 ntBASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 IGHV1-12-201ENST00000518307 205 ntBASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 NUDT4P2-201ENST00000578341 546 ntBASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 MIR6858-201ENST00000620733 67 ntBASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 AP001184.1-201ENST00000637936 376 ntBASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 AC004554.1-201ENST00000422830 1468 ntBASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
KIAA1549Q9HCM3 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 223.6 ms