Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
HDHD3Q9BSH5 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.12□□□□□ -0.47
HDHD3Q9BSH5 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HDHD3Q9BSH5 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
HDHD3Q9BSH5 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.12□□□□□ -0.47
HDHD3Q9BSH5 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HDHD3Q9BSH5 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HDHD3Q9BSH5 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HDHD3Q9BSH5 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
HDHD3Q9BSH5 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HDHD3Q9BSH5 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
HDHD3Q9BSH5 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HDHD3Q9BSH5 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HDHD3Q9BSH5 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC12.12□□□□□ -0.47
HDHD3Q9BSH5 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC12.12□□□□□ -0.47
HDHD3Q9BSH5 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HDHD3Q9BSH5 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HDHD3Q9BSH5 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
HDHD3Q9BSH5 OARD1-208ENST00000469104 704 ntTSL 2 BASIC12.12□□□□□ -0.47
HDHD3Q9BSH5 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC12.12□□□□□ -0.47
HDHD3Q9BSH5 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
HDHD3Q9BSH5 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC12.12□□□□□ -0.47
HDHD3Q9BSH5 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
HDHD3Q9BSH5 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC12.12□□□□□ -0.47
HDHD3Q9BSH5 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC12.12□□□□□ -0.47
HDHD3Q9BSH5 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.12□□□□□ -0.47
HDHD3Q9BSH5 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC12.12□□□□□ -0.47
HDHD3Q9BSH5 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HDHD3Q9BSH5 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
HDHD3Q9BSH5 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
HDHD3Q9BSH5 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
HDHD3Q9BSH5 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HDHD3Q9BSH5 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
HDHD3Q9BSH5 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC12.12□□□□□ -0.47
HDHD3Q9BSH5 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HDHD3Q9BSH5 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HDHD3Q9BSH5 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
HDHD3Q9BSH5 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.12□□□□□ -0.47
HDHD3Q9BSH5 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
HDHD3Q9BSH5 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
HDHD3Q9BSH5 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC12.12□□□□□ -0.47
HDHD3Q9BSH5 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
HDHD3Q9BSH5 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 AL354989.2-201ENST00000435838 1540 ntBASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 MARK2P9-201ENST00000430958 1727 ntBASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 AC125807.2-201ENST00000513358 3514 ntBASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 PCDHB18P-202ENST00000526308 3197 ntBASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 KRT8P4-201ENST00000509735 1454 ntBASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 BCRP2-202ENST00000447763 634 ntBASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 AL035414.1-201ENST00000451327 857 ntBASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 COX5BP1-201ENST00000507622 393 ntBASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 BCRP6-201ENST00000510112 632 ntBASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 BCRP7-201ENST00000511549 544 ntBASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 GPALPP1-207ENST00000611650 899 ntBASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 LINC00567-201ENST00000569854 3409 ntBASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 OS9-218ENST00000551035 2246 ntTSL 2 BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms