Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 FAM8A4P-201ENST00000435433 1213 ntBASIC12.32□□□□□ -0.44
GFI1Q99684 AL645933.1-201ENST00000440087 609 ntBASIC12.32□□□□□ -0.44
GFI1Q99684 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
GFI1Q99684 DUT-210ENST00000559935 569 ntTSL 3 BASIC12.32□□□□□ -0.44
GFI1Q99684 NAA60-208ENST00000570819 833 ntTSL 2 BASIC12.32□□□□□ -0.44
GFI1Q99684 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
GFI1Q99684 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC12.32□□□□□ -0.44
GFI1Q99684 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
GFI1Q99684 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
GFI1Q99684 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
GFI1Q99684 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
GFI1Q99684 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
GFI1Q99684 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC12.32□□□□□ -0.44
GFI1Q99684 STX3-207ENST00000633708 3111 ntTSL 5 BASIC12.32□□□□□ -0.44
GFI1Q99684 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
GFI1Q99684 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
GFI1Q99684 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC12.32□□□□□ -0.44
GFI1Q99684 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
GFI1Q99684 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
GFI1Q99684 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
GFI1Q99684 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
GFI1Q99684 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
GFI1Q99684 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
GFI1Q99684 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GFI1Q99684 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
GFI1Q99684 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
GFI1Q99684 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
GFI1Q99684 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC12.31□□□□□ -0.44
GFI1Q99684 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GFI1Q99684 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC12.31□□□□□ -0.44
GFI1Q99684 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
GFI1Q99684 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.31□□□□□ -0.44
GFI1Q99684 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC12.31□□□□□ -0.44
GFI1Q99684 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GFI1Q99684 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
GFI1Q99684 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC12.31□□□□□ -0.44
GFI1Q99684 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GFI1Q99684 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
GFI1Q99684 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
GFI1Q99684 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GFI1Q99684 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
GFI1Q99684 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
GFI1Q99684 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC12.31□□□□□ -0.44
GFI1Q99684 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
GFI1Q99684 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
GFI1Q99684 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
GFI1Q99684 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GFI1Q99684 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.31□□□□□ -0.44
GFI1Q99684 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GFI1Q99684 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
GFI1Q99684 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GFI1Q99684 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GFI1Q99684 GRAP-202ENST00000395635 834 ntTSL 2 BASIC12.31□□□□□ -0.44
GFI1Q99684 HMGA1P1-201ENST00000415560 1062 ntBASIC12.31□□□□□ -0.44
GFI1Q99684 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC12.31□□□□□ -0.44
GFI1Q99684 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GFI1Q99684 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.31□□□□□ -0.44
GFI1Q99684 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC12.31□□□□□ -0.44
GFI1Q99684 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC12.31□□□□□ -0.44
GFI1Q99684 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC12.31□□□□□ -0.44
GFI1Q99684 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC12.31□□□□□ -0.44
GFI1Q99684 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
GFI1Q99684 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC12.31□□□□□ -0.44
GFI1Q99684 CALM1-205ENST00000553542 877 ntTSL 5 BASIC12.31□□□□□ -0.44
GFI1Q99684 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
GFI1Q99684 AC025279.2-201ENST00000569730 653 ntBASIC12.31□□□□□ -0.44
GFI1Q99684 MIR5189-201ENST00000577370 114 ntBASIC12.31□□□□□ -0.44
GFI1Q99684 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
GFI1Q99684 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC12.31□□□□□ -0.44
GFI1Q99684 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC12.31□□□□□ -0.44
GFI1Q99684 AC009118.2-201ENST00000613275 655 ntBASIC12.31□□□□□ -0.44
GFI1Q99684 AC106028.4-201ENST00000614509 607 ntBASIC12.31□□□□□ -0.44
GFI1Q99684 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC12.31□□□□□ -0.44
GFI1Q99684 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GFI1Q99684 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC12.31□□□□□ -0.44
GFI1Q99684 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC12.31□□□□□ -0.44
GFI1Q99684 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GFI1Q99684 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
GFI1Q99684 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
GFI1Q99684 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.31□□□□□ -0.44
GFI1Q99684 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
GFI1Q99684 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC12.31□□□□□ -0.44
GFI1Q99684 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC12.31□□□□□ -0.44
GFI1Q99684 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GFI1Q99684 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
GFI1Q99684 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC12.31□□□□□ -0.44
GFI1Q99684 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
GFI1Q99684 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC12.31□□□□□ -0.44
GFI1Q99684 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC12.31□□□□□ -0.44
GFI1Q99684 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
GFI1Q99684 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
GFI1Q99684 AC004899.2-201ENST00000622993 3860 ntBASIC12.31□□□□□ -0.44
GFI1Q99684 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
GFI1Q99684 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
GFI1Q99684 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC12.31□□□□□ -0.44
GFI1Q99684 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
GFI1Q99684 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
GFI1Q99684 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
GFI1Q99684 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
GFI1Q99684 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms