Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 SNORA50.1-201ENST00000628590 135 ntBASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 LINC01165-201ENST00000445190 1623 ntBASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 AL359845.1-201ENST00000458202 1648 ntBASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 AL139158.3-201ENST00000641212 1562 ntBASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 SYT17-208ENST00000568433 812 ntTSL 3 BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 AC239800.4-201ENST00000603712 296 ntBASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 AC091271.1-201ENST00000611877 1162 ntBASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.91□□□□□ -0.18
PDLIM5Q96HC4 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDLIM5Q96HC4 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDLIM5Q96HC4 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
PDLIM5Q96HC4 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDLIM5Q96HC4 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDLIM5Q96HC4 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDLIM5Q96HC4 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDLIM5Q96HC4 BRD7P5-201ENST00000299197 1822 ntBASIC13.9□□□□□ -0.18
PDLIM5Q96HC4 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PDLIM5Q96HC4 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms