Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC12.77□□□□□ -0.37
RFT1Q96AA3 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RFT1Q96AA3 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
RFT1Q96AA3 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RFT1Q96AA3 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RFT1Q96AA3 AC003102.2-201ENST00000589195 1469 ntBASIC12.77□□□□□ -0.37
RFT1Q96AA3 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
RFT1Q96AA3 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RFT1Q96AA3 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
RFT1Q96AA3 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
RFT1Q96AA3 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC12.77□□□□□ -0.37
RFT1Q96AA3 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
RFT1Q96AA3 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
RFT1Q96AA3 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
RFT1Q96AA3 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RFT1Q96AA3 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RFT1Q96AA3 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RFT1Q96AA3 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
RFT1Q96AA3 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC12.76□□□□□ -0.37
RFT1Q96AA3 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.76□□□□□ -0.37
RFT1Q96AA3 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RFT1Q96AA3 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
RFT1Q96AA3 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC12.76□□□□□ -0.37
RFT1Q96AA3 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
RFT1Q96AA3 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
RFT1Q96AA3 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.76□□□□□ -0.37
RFT1Q96AA3 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RFT1Q96AA3 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RFT1Q96AA3 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RFT1Q96AA3 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
RFT1Q96AA3 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
RFT1Q96AA3 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RFT1Q96AA3 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RFT1Q96AA3 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RFT1Q96AA3 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
RFT1Q96AA3 DFFBP1-201ENST00000433250 979 ntBASIC12.76□□□□□ -0.37
RFT1Q96AA3 CYMP-203ENST00000474680 1263 ntBASIC12.76□□□□□ -0.37
RFT1Q96AA3 GIMAP3P-201ENST00000495150 836 ntBASIC12.76□□□□□ -0.37
RFT1Q96AA3 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC12.76□□□□□ -0.37
RFT1Q96AA3 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
RFT1Q96AA3 RNA5SP421-201ENST00000516864 134 ntBASIC12.76□□□□□ -0.37
RFT1Q96AA3 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC12.76□□□□□ -0.37
RFT1Q96AA3 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RFT1Q96AA3 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC12.76□□□□□ -0.37
RFT1Q96AA3 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RFT1Q96AA3 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC12.76□□□□□ -0.37
RFT1Q96AA3 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12.76□□□□□ -0.37
RFT1Q96AA3 AC092364.2-202ENST00000597012 1073 ntBASIC12.76□□□□□ -0.37
RFT1Q96AA3 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC12.76□□□□□ -0.37
RFT1Q96AA3 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC12.76□□□□□ -0.37
RFT1Q96AA3 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
RFT1Q96AA3 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC12.76□□□□□ -0.37
RFT1Q96AA3 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC12.76□□□□□ -0.37
RFT1Q96AA3 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC12.76□□□□□ -0.37
RFT1Q96AA3 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC12.76□□□□□ -0.37
RFT1Q96AA3 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.76□□□□□ -0.37
RFT1Q96AA3 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
RFT1Q96AA3 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RFT1Q96AA3 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.76□□□□□ -0.37
RFT1Q96AA3 AGER-206ENST00000375070 1463 ntTSL 5 BASIC12.76□□□□□ -0.37
RFT1Q96AA3 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
RFT1Q96AA3 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RFT1Q96AA3 AC024075.2-201ENST00000598112 1473 ntBASIC12.76□□□□□ -0.37
RFT1Q96AA3 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RFT1Q96AA3 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
RFT1Q96AA3 AC015688.4-201ENST00000580780 1647 ntBASIC12.76□□□□□ -0.37
RFT1Q96AA3 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.76□□□□□ -0.37
RFT1Q96AA3 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RFT1Q96AA3 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RFT1Q96AA3 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RFT1Q96AA3 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
RFT1Q96AA3 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RFT1Q96AA3 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RFT1Q96AA3 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RFT1Q96AA3 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC12.76□□□□□ -0.37
RFT1Q96AA3 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
RFT1Q96AA3 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC12.75□□□□□ -0.37
RFT1Q96AA3 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
RFT1Q96AA3 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
RFT1Q96AA3 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
RFT1Q96AA3 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RFT1Q96AA3 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RFT1Q96AA3 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
RFT1Q96AA3 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC12.75□□□□□ -0.37
RFT1Q96AA3 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
RFT1Q96AA3 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
RFT1Q96AA3 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RFT1Q96AA3 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RFT1Q96AA3 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RFT1Q96AA3 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
RFT1Q96AA3 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RFT1Q96AA3 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RFT1Q96AA3 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
RFT1Q96AA3 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RFT1Q96AA3 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RFT1Q96AA3 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RFT1Q96AA3 GGCT-205ENST00000409436 954 ntTSL 3 BASIC12.75□□□□□ -0.37
RFT1Q96AA3 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
RFT1Q96AA3 AC136604.1-202ENST00000425471 771 ntBASIC12.75□□□□□ -0.37
RFT1Q96AA3 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms