Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SHKBP1Q8TBC3 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SHKBP1Q8TBC3 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
SHKBP1Q8TBC3 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SHKBP1Q8TBC3 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
SHKBP1Q8TBC3 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15□□□□□ -0.01
SHKBP1Q8TBC3 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC15□□□□□ -0.01
SHKBP1Q8TBC3 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC15□□□□□ -0.01
SHKBP1Q8TBC3 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC15□□□□□ -0.01
SHKBP1Q8TBC3 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC15□□□□□ -0.01
SHKBP1Q8TBC3 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC15□□□□□ -0.01
SHKBP1Q8TBC3 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC15□□□□□ -0.01
SHKBP1Q8TBC3 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC15□□□□□ -0.01
SHKBP1Q8TBC3 ALG1L13P-202ENST00000519320 584 ntBASIC15□□□□□ -0.01
SHKBP1Q8TBC3 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC15□□□□□ -0.01
SHKBP1Q8TBC3 SORD2P-201ENST00000558556 1069 ntBASIC15□□□□□ -0.01
SHKBP1Q8TBC3 AC140658.4-201ENST00000561990 352 ntBASIC15□□□□□ -0.01
SHKBP1Q8TBC3 AC005586.2-201ENST00000563946 837 ntBASIC15□□□□□ -0.01
SHKBP1Q8TBC3 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC15□□□□□ -0.01
SHKBP1Q8TBC3 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SHKBP1Q8TBC3 GMFG-209ENST00000600322 622 ntTSL 5 BASIC15□□□□□ -0.01
SHKBP1Q8TBC3 AC107464.3-201ENST00000609172 737 ntBASIC15□□□□□ -0.01
SHKBP1Q8TBC3 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC15□□□□□ -0.01
SHKBP1Q8TBC3 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
SHKBP1Q8TBC3 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SHKBP1Q8TBC3 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SHKBP1Q8TBC3 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15□□□□□ -0.01
SHKBP1Q8TBC3 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15□□□□□ -0.01
SHKBP1Q8TBC3 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
SHKBP1Q8TBC3 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SHKBP1Q8TBC3 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SHKBP1Q8TBC3 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SHKBP1Q8TBC3 LAP3P2-201ENST00000454686 1454 ntBASIC15□□□□□ -0.01
SHKBP1Q8TBC3 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
SHKBP1Q8TBC3 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
SHKBP1Q8TBC3 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SHKBP1Q8TBC3 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15□□□□□ -0.01
SHKBP1Q8TBC3 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
SHKBP1Q8TBC3 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15□□□□□ -0.01
SHKBP1Q8TBC3 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15□□□□□ -0.01
SHKBP1Q8TBC3 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
SHKBP1Q8TBC3 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHKBP1Q8TBC3 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHKBP1Q8TBC3 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.99□□□□□ -0.01
SHKBP1Q8TBC3 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
SHKBP1Q8TBC3 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SHKBP1Q8TBC3 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
SHKBP1Q8TBC3 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.99□□□□□ -0.01
SHKBP1Q8TBC3 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
SHKBP1Q8TBC3 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SHKBP1Q8TBC3 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.99□□□□□ -0.01
SHKBP1Q8TBC3 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHKBP1Q8TBC3 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SHKBP1Q8TBC3 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHKBP1Q8TBC3 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SHKBP1Q8TBC3 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHKBP1Q8TBC3 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SHKBP1Q8TBC3 HLA-DMA-203ENST00000395305 777 ntBASIC14.99□□□□□ -0.01
SHKBP1Q8TBC3 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SHKBP1Q8TBC3 HIST2H2BA-201ENST00000412169 381 ntBASIC14.99□□□□□ -0.01
SHKBP1Q8TBC3 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SHKBP1Q8TBC3 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC14.99□□□□□ -0.01
SHKBP1Q8TBC3 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC14.99□□□□□ -0.01
SHKBP1Q8TBC3 MIR3180-2-201ENST00000581748 88 ntBASIC14.99□□□□□ -0.01
SHKBP1Q8TBC3 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC14.99□□□□□ -0.01
SHKBP1Q8TBC3 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SHKBP1Q8TBC3 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC14.99□□□□□ -0.01
SHKBP1Q8TBC3 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC14.99□□□□□ -0.01
SHKBP1Q8TBC3 MIR6858-201ENST00000620733 67 ntBASIC14.99□□□□□ -0.01
SHKBP1Q8TBC3 AC073911.3-201ENST00000624401 631 ntBASIC14.99□□□□□ -0.01
SHKBP1Q8TBC3 AL161773.1-201ENST00000624845 863 ntBASIC14.99□□□□□ -0.01
SHKBP1Q8TBC3 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHKBP1Q8TBC3 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHKBP1Q8TBC3 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHKBP1Q8TBC3 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHKBP1Q8TBC3 MYADML-201ENST00000474610 2147 ntBASIC14.99□□□□□ -0.01
SHKBP1Q8TBC3 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
SHKBP1Q8TBC3 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
SHKBP1Q8TBC3 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHKBP1Q8TBC3 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
SHKBP1Q8TBC3 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SHKBP1Q8TBC3 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHKBP1Q8TBC3 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
SHKBP1Q8TBC3 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC14.99□□□□□ -0.01
SHKBP1Q8TBC3 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.99□□□□□ -0.01
SHKBP1Q8TBC3 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
SHKBP1Q8TBC3 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHKBP1Q8TBC3 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.98□□□□□ -0.01
SHKBP1Q8TBC3 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.98□□□□□ -0.01
SHKBP1Q8TBC3 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.98□□□□□ -0.01
SHKBP1Q8TBC3 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SHKBP1Q8TBC3 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHKBP1Q8TBC3 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SHKBP1Q8TBC3 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHKBP1Q8TBC3 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SHKBP1Q8TBC3 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.98□□□□□ -0.01
SHKBP1Q8TBC3 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SHKBP1Q8TBC3 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.98□□□□□ -0.01
SHKBP1Q8TBC3 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHKBP1Q8TBC3 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms