Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 AL928921.2-201ENST00000641325 2442 ntBASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 LINC00265-2P-201ENST00000413372 782 ntBASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 MAGEA5-201ENST00000446757 942 ntBASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 AC130709.1-201ENST00000484779 1212 ntBASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 MRPL22P1-201ENST00000505398 616 ntBASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 NAA40-205ENST00000539656 577 ntTSL 4 BASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 AC005632.3-201ENST00000605544 308 ntBASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 KRT8P43-201ENST00000406052 1458 ntBASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 RCC2P1-201ENST00000452257 1476 ntBASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 SBF1P1-201ENST00000444527 5631 ntBASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
ARHGEF39Q8N4T4 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 HCG18-245ENST00000602550 559 ntTSL 4 BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 AC103810.10-201ENST00000606504 343 ntBASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms