Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NPAS3Q8IXF0 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC14.71□□□□□ -0.05
NPAS3Q8IXF0 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC14.71□□□□□ -0.05
NPAS3Q8IXF0 KRT17P4-201ENST00000429445 819 ntBASIC14.71□□□□□ -0.05
NPAS3Q8IXF0 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC14.71□□□□□ -0.05
NPAS3Q8IXF0 RN7SL494P-201ENST00000461517 304 ntBASIC14.71□□□□□ -0.05
NPAS3Q8IXF0 RN7SL375P-201ENST00000492442 298 ntBASIC14.71□□□□□ -0.05
NPAS3Q8IXF0 CHCHD2P2-201ENST00000503744 321 ntBASIC14.71□□□□□ -0.05
NPAS3Q8IXF0 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC14.71□□□□□ -0.05
NPAS3Q8IXF0 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NPAS3Q8IXF0 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC14.71□□□□□ -0.05
NPAS3Q8IXF0 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC14.71□□□□□ -0.05
NPAS3Q8IXF0 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC14.71□□□□□ -0.05
NPAS3Q8IXF0 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC14.71□□□□□ -0.05
NPAS3Q8IXF0 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC14.71□□□□□ -0.05
NPAS3Q8IXF0 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
NPAS3Q8IXF0 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC14.71□□□□□ -0.05
NPAS3Q8IXF0 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
NPAS3Q8IXF0 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC14.71□□□□□ -0.05
NPAS3Q8IXF0 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.71□□□□□ -0.05
NPAS3Q8IXF0 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
NPAS3Q8IXF0 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NPAS3Q8IXF0 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NPAS3Q8IXF0 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.71□□□□□ -0.05
NPAS3Q8IXF0 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NPAS3Q8IXF0 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
NPAS3Q8IXF0 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC14.71□□□□□ -0.06
NPAS3Q8IXF0 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
NPAS3Q8IXF0 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
NPAS3Q8IXF0 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.06
NPAS3Q8IXF0 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
NPAS3Q8IXF0 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
NPAS3Q8IXF0 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
NPAS3Q8IXF0 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
NPAS3Q8IXF0 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NPAS3Q8IXF0 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.7□□□□□ -0.06
NPAS3Q8IXF0 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.7□□□□□ -0.06
NPAS3Q8IXF0 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPAS3Q8IXF0 AL136379.1-201ENST00000623471 2642 ntBASIC14.7□□□□□ -0.06
NPAS3Q8IXF0 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.7□□□□□ -0.06
NPAS3Q8IXF0 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.7□□□□□ -0.06
NPAS3Q8IXF0 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.7□□□□□ -0.06
NPAS3Q8IXF0 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NPAS3Q8IXF0 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
NPAS3Q8IXF0 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NPAS3Q8IXF0 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPAS3Q8IXF0 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
NPAS3Q8IXF0 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC14.7□□□□□ -0.06
NPAS3Q8IXF0 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC14.7□□□□□ -0.06
NPAS3Q8IXF0 OR2A1-AS1-210ENST00000496968 531 ntBASIC14.7□□□□□ -0.06
NPAS3Q8IXF0 FAM86B3P-203ENST00000523992 854 ntBASIC14.7□□□□□ -0.06
NPAS3Q8IXF0 MIR4265-201ENST00000582152 99 ntBASIC14.7□□□□□ -0.06
NPAS3Q8IXF0 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC14.7□□□□□ -0.06
NPAS3Q8IXF0 RNF146-211ENST00000609447 607 ntTSL 4 BASIC14.7□□□□□ -0.06
NPAS3Q8IXF0 ETV2-207ENST00000619399 994 ntTSL 5 BASIC14.7□□□□□ -0.06
NPAS3Q8IXF0 AC091769.1-201ENST00000619576 568 ntBASIC14.7□□□□□ -0.06
NPAS3Q8IXF0 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC14.7□□□□□ -0.06
NPAS3Q8IXF0 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
NPAS3Q8IXF0 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPAS3Q8IXF0 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.7□□□□□ -0.06
NPAS3Q8IXF0 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC14.7□□□□□ -0.06
NPAS3Q8IXF0 AC232323.1-201ENST00000540724 2099 ntBASIC14.7□□□□□ -0.06
NPAS3Q8IXF0 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC14.7□□□□□ -0.06
NPAS3Q8IXF0 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPAS3Q8IXF0 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.7□□□□□ -0.06
NPAS3Q8IXF0 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.7□□□□□ -0.06
NPAS3Q8IXF0 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
NPAS3Q8IXF0 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
NPAS3Q8IXF0 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.7□□□□□ -0.06
NPAS3Q8IXF0 AL390755.1-201ENST00000623716 2027 ntBASIC14.7□□□□□ -0.06
NPAS3Q8IXF0 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPAS3Q8IXF0 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
NPAS3Q8IXF0 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
NPAS3Q8IXF0 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPAS3Q8IXF0 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPAS3Q8IXF0 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.69□□□□□ -0.06
NPAS3Q8IXF0 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NPAS3Q8IXF0 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
NPAS3Q8IXF0 OR2I1P-209ENST00000641730 5365 ntBASIC14.69□□□□□ -0.06
NPAS3Q8IXF0 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPAS3Q8IXF0 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NPAS3Q8IXF0 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NPAS3Q8IXF0 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPAS3Q8IXF0 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NPAS3Q8IXF0 OR2I1P-210ENST00000642037 4691 ntBASIC14.69□□□□□ -0.06
NPAS3Q8IXF0 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPAS3Q8IXF0 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPAS3Q8IXF0 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.69□□□□□ -0.06
NPAS3Q8IXF0 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.69□□□□□ -0.06
NPAS3Q8IXF0 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
NPAS3Q8IXF0 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPAS3Q8IXF0 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.69□□□□□ -0.06
NPAS3Q8IXF0 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPAS3Q8IXF0 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.69□□□□□ -0.06
NPAS3Q8IXF0 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
NPAS3Q8IXF0 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NPAS3Q8IXF0 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NPAS3Q8IXF0 OR52M2P-201ENST00000414298 959 ntBASIC14.69□□□□□ -0.06
NPAS3Q8IXF0 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC14.69□□□□□ -0.06
NPAS3Q8IXF0 AC092573.1-201ENST00000433054 884 ntBASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms