Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.72□□□□□ -0.05
CDKL3Q8IVW4 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDKL3Q8IVW4 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDKL3Q8IVW4 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.71□□□□□ -0.05
CDKL3Q8IVW4 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.71□□□□□ -0.05
CDKL3Q8IVW4 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDKL3Q8IVW4 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDKL3Q8IVW4 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.71□□□□□ -0.05
CDKL3Q8IVW4 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDKL3Q8IVW4 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDKL3Q8IVW4 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDKL3Q8IVW4 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDKL3Q8IVW4 PTENP1-202ENST00000532280 3996 ntBASIC14.71□□□□□ -0.05
CDKL3Q8IVW4 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDKL3Q8IVW4 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDKL3Q8IVW4 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDKL3Q8IVW4 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDKL3Q8IVW4 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.71□□□□□ -0.05
CDKL3Q8IVW4 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDKL3Q8IVW4 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDKL3Q8IVW4 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDKL3Q8IVW4 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDKL3Q8IVW4 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CDKL3Q8IVW4 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDKL3Q8IVW4 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
CDKL3Q8IVW4 MTX1P1-201ENST00000440904 838 ntBASIC14.71□□□□□ -0.05
CDKL3Q8IVW4 OR2R1P-201ENST00000441404 914 ntBASIC14.71□□□□□ -0.05
CDKL3Q8IVW4 HSPB1P2-201ENST00000448722 546 ntBASIC14.71□□□□□ -0.05
CDKL3Q8IVW4 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDKL3Q8IVW4 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.71□□□□□ -0.05
CDKL3Q8IVW4 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.71□□□□□ -0.05
CDKL3Q8IVW4 AP005482.1-201ENST00000563722 1273 ntBASIC14.71□□□□□ -0.05
CDKL3Q8IVW4 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDKL3Q8IVW4 AC008805.1-201ENST00000590892 364 ntBASIC14.71□□□□□ -0.05
CDKL3Q8IVW4 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.71□□□□□ -0.05
CDKL3Q8IVW4 AC133552.6-201ENST00000613406 534 ntBASIC14.71□□□□□ -0.05
CDKL3Q8IVW4 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDKL3Q8IVW4 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
CDKL3Q8IVW4 AC105206.1-202ENST00000314927 2368 ntBASIC14.71□□□□□ -0.05
CDKL3Q8IVW4 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CDKL3Q8IVW4 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDKL3Q8IVW4 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC14.71□□□□□ -0.05
CDKL3Q8IVW4 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC14.71□□□□□ -0.05
CDKL3Q8IVW4 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
CDKL3Q8IVW4 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDKL3Q8IVW4 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDKL3Q8IVW4 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CDKL3Q8IVW4 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CDKL3Q8IVW4 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CDKL3Q8IVW4 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CDKL3Q8IVW4 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CDKL3Q8IVW4 NCLP1-201ENST00000445357 1963 ntBASIC14.71□□□□□ -0.06
CDKL3Q8IVW4 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC14.71□□□□□ -0.06
CDKL3Q8IVW4 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.71□□□□□ -0.06
CDKL3Q8IVW4 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.06
CDKL3Q8IVW4 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
CDKL3Q8IVW4 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
CDKL3Q8IVW4 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
CDKL3Q8IVW4 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDKL3Q8IVW4 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDKL3Q8IVW4 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.7□□□□□ -0.06
CDKL3Q8IVW4 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.7□□□□□ -0.06
CDKL3Q8IVW4 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
CDKL3Q8IVW4 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.7□□□□□ -0.06
CDKL3Q8IVW4 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.7□□□□□ -0.06
CDKL3Q8IVW4 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.7□□□□□ -0.06
CDKL3Q8IVW4 AC018629.1-201ENST00000623381 1736 ntBASIC14.7□□□□□ -0.06
CDKL3Q8IVW4 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDKL3Q8IVW4 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDKL3Q8IVW4 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC14.7□□□□□ -0.06
CDKL3Q8IVW4 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CDKL3Q8IVW4 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
CDKL3Q8IVW4 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDKL3Q8IVW4 AC103592.1-201ENST00000394513 664 ntBASIC14.7□□□□□ -0.06
CDKL3Q8IVW4 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.7□□□□□ -0.06
CDKL3Q8IVW4 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.7□□□□□ -0.06
CDKL3Q8IVW4 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.7□□□□□ -0.06
CDKL3Q8IVW4 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CDKL3Q8IVW4 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.7□□□□□ -0.06
CDKL3Q8IVW4 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.7□□□□□ -0.06
CDKL3Q8IVW4 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.7□□□□□ -0.06
CDKL3Q8IVW4 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDKL3Q8IVW4 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC14.7□□□□□ -0.06
CDKL3Q8IVW4 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.7□□□□□ -0.06
CDKL3Q8IVW4 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC14.7□□□□□ -0.06
CDKL3Q8IVW4 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.7□□□□□ -0.06
CDKL3Q8IVW4 AL035252.4-201ENST00000624174 288 ntBASIC14.7□□□□□ -0.06
CDKL3Q8IVW4 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDKL3Q8IVW4 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDKL3Q8IVW4 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDKL3Q8IVW4 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CDKL3Q8IVW4 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.7□□□□□ -0.06
CDKL3Q8IVW4 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC14.7□□□□□ -0.06
CDKL3Q8IVW4 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.7□□□□□ -0.06
CDKL3Q8IVW4 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDKL3Q8IVW4 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
CDKL3Q8IVW4 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDKL3Q8IVW4 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.7□□□□□ -0.06
CDKL3Q8IVW4 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDKL3Q8IVW4 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms