Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TTC39BQ5VTQ0 AL157791.1-201ENST00000553667 1699 ntBASIC14.94□□□□□ -0.02
TTC39BQ5VTQ0 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TTC39BQ5VTQ0 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TTC39BQ5VTQ0 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.94□□□□□ -0.02
TTC39BQ5VTQ0 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.94□□□□□ -0.02
TTC39BQ5VTQ0 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.94□□□□□ -0.02
TTC39BQ5VTQ0 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TTC39BQ5VTQ0 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
TTC39BQ5VTQ0 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TTC39BQ5VTQ0 CICP17-201ENST00000418553 2377 ntBASIC14.94□□□□□ -0.02
TTC39BQ5VTQ0 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TTC39BQ5VTQ0 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TTC39BQ5VTQ0 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TTC39BQ5VTQ0 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.94□□□□□ -0.02
TTC39BQ5VTQ0 AL161932.2-201ENST00000435436 679 ntBASIC14.94□□□□□ -0.02
TTC39BQ5VTQ0 PGAM1P5-201ENST00000548011 764 ntBASIC14.94□□□□□ -0.02
TTC39BQ5VTQ0 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.94□□□□□ -0.02
TTC39BQ5VTQ0 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.94□□□□□ -0.02
TTC39BQ5VTQ0 AC021016.3-201ENST00000608367 477 ntBASIC14.94□□□□□ -0.02
TTC39BQ5VTQ0 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC14.94□□□□□ -0.02
TTC39BQ5VTQ0 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.94□□□□□ -0.02
TTC39BQ5VTQ0 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.94□□□□□ -0.02
TTC39BQ5VTQ0 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.94□□□□□ -0.02
TTC39BQ5VTQ0 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TTC39BQ5VTQ0 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.94□□□□□ -0.02
TTC39BQ5VTQ0 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
TTC39BQ5VTQ0 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TTC39BQ5VTQ0 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.94□□□□□ -0.02
TTC39BQ5VTQ0 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TTC39BQ5VTQ0 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TTC39BQ5VTQ0 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TTC39BQ5VTQ0 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TTC39BQ5VTQ0 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TTC39BQ5VTQ0 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.94□□□□□ -0.02
TTC39BQ5VTQ0 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
TTC39BQ5VTQ0 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TTC39BQ5VTQ0 PTENP1-202ENST00000532280 3996 ntBASIC14.93□□□□□ -0.02
TTC39BQ5VTQ0 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TTC39BQ5VTQ0 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TTC39BQ5VTQ0 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TTC39BQ5VTQ0 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
TTC39BQ5VTQ0 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TTC39BQ5VTQ0 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TTC39BQ5VTQ0 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TTC39BQ5VTQ0 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TTC39BQ5VTQ0 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TTC39BQ5VTQ0 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.93□□□□□ -0.02
TTC39BQ5VTQ0 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TTC39BQ5VTQ0 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TTC39BQ5VTQ0 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
TTC39BQ5VTQ0 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.93□□□□□ -0.02
TTC39BQ5VTQ0 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TTC39BQ5VTQ0 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.93□□□□□ -0.02
TTC39BQ5VTQ0 OR2R1P-201ENST00000441404 914 ntBASIC14.93□□□□□ -0.02
TTC39BQ5VTQ0 AC005077.2-201ENST00000449786 690 ntBASIC14.93□□□□□ -0.02
TTC39BQ5VTQ0 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TTC39BQ5VTQ0 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC14.93□□□□□ -0.02
TTC39BQ5VTQ0 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.93□□□□□ -0.02
TTC39BQ5VTQ0 AC090857.1-201ENST00000527400 390 ntBASIC14.93□□□□□ -0.02
TTC39BQ5VTQ0 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC14.93□□□□□ -0.02
TTC39BQ5VTQ0 AL157813.1-201ENST00000612996 587 ntBASIC14.93□□□□□ -0.02
TTC39BQ5VTQ0 AL591471.1-201ENST00000621855 229 ntBASIC14.93□□□□□ -0.02
TTC39BQ5VTQ0 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC14.93□□□□□ -0.02
TTC39BQ5VTQ0 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.93□□□□□ -0.02
TTC39BQ5VTQ0 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.93□□□□□ -0.02
TTC39BQ5VTQ0 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TTC39BQ5VTQ0 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
TTC39BQ5VTQ0 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.93□□□□□ -0.02
TTC39BQ5VTQ0 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.93□□□□□ -0.02
TTC39BQ5VTQ0 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.93□□□□□ -0.02
TTC39BQ5VTQ0 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TTC39BQ5VTQ0 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.93□□□□□ -0.02
TTC39BQ5VTQ0 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.93□□□□□ -0.02
TTC39BQ5VTQ0 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TTC39BQ5VTQ0 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TTC39BQ5VTQ0 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TTC39BQ5VTQ0 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TTC39BQ5VTQ0 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TTC39BQ5VTQ0 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TTC39BQ5VTQ0 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
TTC39BQ5VTQ0 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.92□□□□□ -0.02
TTC39BQ5VTQ0 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.92□□□□□ -0.02
TTC39BQ5VTQ0 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TTC39BQ5VTQ0 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TTC39BQ5VTQ0 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TTC39BQ5VTQ0 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TTC39BQ5VTQ0 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TTC39BQ5VTQ0 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TTC39BQ5VTQ0 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
TTC39BQ5VTQ0 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
TTC39BQ5VTQ0 BCYRN1-201ENST00000418539 200 ntBASIC14.92□□□□□ -0.02
TTC39BQ5VTQ0 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC14.92□□□□□ -0.02
TTC39BQ5VTQ0 KRTAP19-9P-201ENST00000421795 191 ntBASIC14.92□□□□□ -0.02
TTC39BQ5VTQ0 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.92□□□□□ -0.02
TTC39BQ5VTQ0 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC14.92□□□□□ -0.02
TTC39BQ5VTQ0 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TTC39BQ5VTQ0 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC14.92□□□□□ -0.02
TTC39BQ5VTQ0 ACTG1P17-201ENST00000558391 1119 ntBASIC14.92□□□□□ -0.02
TTC39BQ5VTQ0 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms