Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBA52P62987 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBA52P62987 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBA52P62987 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UBA52P62987 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.48□□□□□ -0.41
UBA52P62987 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBA52P62987 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBA52P62987 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBA52P62987 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UBA52P62987 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UBA52P62987 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBA52P62987 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.48□□□□□ -0.41
UBA52P62987 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBA52P62987 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBA52P62987 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBA52P62987 TP73-209ENST00000603362 1668 ntTSL 5 BASIC12.48□□□□□ -0.41
UBA52P62987 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
UBA52P62987 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UBA52P62987 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC12.48□□□□□ -0.41
UBA52P62987 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBA52P62987 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC12.48□□□□□ -0.41
UBA52P62987 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC12.47□□□□□ -0.41
UBA52P62987 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBA52P62987 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBA52P62987 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.47□□□□□ -0.41
UBA52P62987 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC12.47□□□□□ -0.41
UBA52P62987 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
UBA52P62987 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBA52P62987 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.47□□□□□ -0.41
UBA52P62987 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBA52P62987 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
UBA52P62987 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC12.47□□□□□ -0.41
UBA52P62987 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBA52P62987 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBA52P62987 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
UBA52P62987 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.47□□□□□ -0.41
UBA52P62987 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBA52P62987 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBA52P62987 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
UBA52P62987 AP002761.4-201ENST00000565433 3361 ntBASIC12.47□□□□□ -0.41
UBA52P62987 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
UBA52P62987 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
UBA52P62987 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBA52P62987 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC12.47□□□□□ -0.41
UBA52P62987 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBA52P62987 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBA52P62987 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBA52P62987 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
UBA52P62987 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
UBA52P62987 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBA52P62987 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC12.47□□□□□ -0.41
UBA52P62987 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBA52P62987 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC12.47□□□□□ -0.41
UBA52P62987 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC12.47□□□□□ -0.41
UBA52P62987 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC12.47□□□□□ -0.41
UBA52P62987 FAM86HP-204ENST00000513466 959 ntBASIC12.47□□□□□ -0.41
UBA52P62987 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
UBA52P62987 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC12.47□□□□□ -0.41
UBA52P62987 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC12.47□□□□□ -0.41
UBA52P62987 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC12.47□□□□□ -0.41
UBA52P62987 AL118558.3-201ENST00000607414 1079 ntBASIC12.47□□□□□ -0.41
UBA52P62987 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC12.47□□□□□ -0.41
UBA52P62987 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBA52P62987 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBA52P62987 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBA52P62987 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBA52P62987 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
UBA52P62987 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
UBA52P62987 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBA52P62987 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
UBA52P62987 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBA52P62987 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBA52P62987 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBA52P62987 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
UBA52P62987 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBA52P62987 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
UBA52P62987 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.47□□□□□ -0.41
UBA52P62987 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC12.47□□□□□ -0.41
UBA52P62987 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBA52P62987 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
UBA52P62987 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
UBA52P62987 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
UBA52P62987 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
UBA52P62987 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBA52P62987 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
UBA52P62987 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBA52P62987 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBA52P62987 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBA52P62987 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
UBA52P62987 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBA52P62987 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBA52P62987 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBA52P62987 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBA52P62987 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
UBA52P62987 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC12.46□□□□□ -0.41
UBA52P62987 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBA52P62987 AGER-206ENST00000375070 1463 ntTSL 5 BASIC12.46□□□□□ -0.41
UBA52P62987 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
UBA52P62987 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
UBA52P62987 AC012508.2-201ENST00000567613 1472 ntBASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms