Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
DEFA3P59666 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
DEFA3P59666 CEACAM20-203ENST00000614924 1809 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
DEFA3P59666 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
DEFA3P59666 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC12.54□□□□□ -0.4
DEFA3P59666 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC12.54□□□□□ -0.4
DEFA3P59666 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
DEFA3P59666 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC12.54□□□□□ -0.4
DEFA3P59666 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
DEFA3P59666 AC002056.1-201ENST00000395613 760 ntBASIC12.54□□□□□ -0.4
DEFA3P59666 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC12.54□□□□□ -0.4
DEFA3P59666 AC074338.1-201ENST00000416825 156 ntBASIC12.54□□□□□ -0.4
DEFA3P59666 ZNF286A-203ENST00000421016 5541 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
DEFA3P59666 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC12.54□□□□□ -0.4
DEFA3P59666 CRCP-205ENST00000431089 942 ntTSL 2 BASIC12.54□□□□□ -0.4
DEFA3P59666 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
DEFA3P59666 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
DEFA3P59666 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
DEFA3P59666 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
DEFA3P59666 DPYSL2-206ENST00000523027 2130 ntTSL 2 BASIC12.54□□□□□ -0.4
DEFA3P59666 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
DEFA3P59666 TCAP-202ENST00000578283 583 ntTSL 5 BASIC12.54□□□□□ -0.4
DEFA3P59666 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC12.54□□□□□ -0.4
DEFA3P59666 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC12.54□□□□□ -0.4
DEFA3P59666 CLEC4GP1-201ENST00000596555 870 ntBASIC12.54□□□□□ -0.4
DEFA3P59666 CR392039.2-201ENST00000623182 509 ntBASIC12.54□□□□□ -0.4
DEFA3P59666 AC116407.4-201ENST00000623319 1061 ntBASIC12.54□□□□□ -0.4
DEFA3P59666 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
DEFA3P59666 RNF213-201ENST00000319921 5316 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
DEFA3P59666 XRCC3-202ENST00000553264 3018 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
DEFA3P59666 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
DEFA3P59666 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC12.54□□□□□ -0.4
DEFA3P59666 SMG8-202ENST00000543872 3477 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
DEFA3P59666 NUF2-201ENST00000271452 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
DEFA3P59666 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC12.54□□□□□ -0.4
DEFA3P59666 AL132642.2-201ENST00000623423 1998 ntBASIC12.54□□□□□ -0.4
DEFA3P59666 PIWIL1-201ENST00000245255 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
DEFA3P59666 PHC2-201ENST00000257118 3870 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
DEFA3P59666 GRM4-204ENST00000535756 6670 ntTSL 5 BASIC12.54□□□□□ -0.4
DEFA3P59666 LGR6-203ENST00000367278 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
DEFA3P59666 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
DEFA3P59666 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
DEFA3P59666 CST3-203ENST00000398411 3286 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
DEFA3P59666 TRHDE-AS1-202ENST00000435350 2966 ntTSL 2 BASIC12.54□□□□□ -0.4
DEFA3P59666 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.54□□□□□ -0.4
DEFA3P59666 KIAA0368-202ENST00000338205 7078 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
DEFA3P59666 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
DEFA3P59666 MCM3AP-201ENST00000291688 6193 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
DEFA3P59666 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
DEFA3P59666 ARHGAP20-202ENST00000524756 6180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
DEFA3P59666 COL8A1-202ENST00000273342 3029 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
DEFA3P59666 PDZRN3-205ENST00000466780 2737 ntTSL 2 BASIC12.53□□□□□ -0.4
DEFA3P59666 PCDH12-201ENST00000231484 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DEFA3P59666 TJAP1-202ENST00000372444 2778 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
DEFA3P59666 TJAP1-203ENST00000372445 2751 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
DEFA3P59666 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DEFA3P59666 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
DEFA3P59666 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
DEFA3P59666 AP002414.3-201ENST00000589352 1468 ntBASIC12.53□□□□□ -0.4
DEFA3P59666 MID1IP1-204ENST00000614558 3781 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
DEFA3P59666 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.53□□□□□ -0.4
DEFA3P59666 EGFR-AS1-201ENST00000442411 2806 ntTSL 2 BASIC12.53□□□□□ -0.4
DEFA3P59666 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC12.53□□□□□ -0.4
DEFA3P59666 FERMT2-202ENST00000343279 3247 ntTSL 5 BASIC12.53□□□□□ -0.4
DEFA3P59666 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DEFA3P59666 POM121L4P-202ENST00000427789 1891 ntBASIC12.53□□□□□ -0.4
DEFA3P59666 TSPAN9-201ENST00000011898 4323 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DEFA3P59666 DHX58-201ENST00000251642 2617 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DEFA3P59666 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.53□□□□□ -0.4
DEFA3P59666 ADAMTS10-211ENST00000597188 3749 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
DEFA3P59666 GOLGA8CP-201ENST00000446144 5237 ntBASIC12.53□□□□□ -0.4
DEFA3P59666 GOLGA8F-201ENST00000526619 5237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
DEFA3P59666 HECW2-202ENST00000409111 6692 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
DEFA3P59666 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
DEFA3P59666 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
DEFA3P59666 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
DEFA3P59666 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DEFA3P59666 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
DEFA3P59666 CRYGEP-201ENST00000412192 528 ntBASIC12.53□□□□□ -0.4
DEFA3P59666 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DEFA3P59666 KRT18P64-201ENST00000434946 1219 ntBASIC12.53□□□□□ -0.4
DEFA3P59666 AC108751.1-201ENST00000490852 363 ntBASIC12.53□□□□□ -0.4
DEFA3P59666 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC12.53□□□□□ -0.4
DEFA3P59666 AC073648.2-201ENST00000510116 352 ntBASIC12.53□□□□□ -0.4
DEFA3P59666 FOSL1P1-201ENST00000511041 816 ntBASIC12.53□□□□□ -0.4
DEFA3P59666 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
DEFA3P59666 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC12.53□□□□□ -0.4
DEFA3P59666 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.53□□□□□ -0.4
DEFA3P59666 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC12.53□□□□□ -0.4
DEFA3P59666 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC12.53□□□□□ -0.4
DEFA3P59666 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
DEFA3P59666 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
DEFA3P59666 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
DEFA3P59666 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DEFA3P59666 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
DEFA3P59666 AL354861.3-201ENST00000600140 2412 ntBASIC12.53□□□□□ -0.4
DEFA3P59666 OPRK1-206ENST00000613482 4682 ntTSL 5 BASIC12.53□□□□□ -0.4
DEFA3P59666 CDK5RAP2-201ENST00000349780 6228 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
DEFA3P59666 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
DEFA3P59666 GRK7-201ENST00000264952 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms